Gene Meso_2979 details

Gene Information

• Locus tag: Meso_2979
• ID: 4181415
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chelativorans sp. BNC1
• Kingdom: Bacteria
• Replicon accession: NC_008254
• Strand: +
• Start bp: 3239264
• End bp: 3239896
• Gene Length: 633 bp
• Protein Length: 210 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 638068863
• Product: binding-protein-dependent transport systems inner membrane component
• Protein accession: YP_675516
• Protein GI: 110635308
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG1174] ABC-type proline/glycine betaine transport systems, permease component

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGTGGG CACCCCGGAA TCTGGATGAC ATCTTCGCGG CCGTTATCCA GCATCTTTAT 
CTGGTCGTCT CTTCCGTAGG CATCGCCCTG ATCATCTCAC TGGTGGTCGG CATCTGGGTT 
GCGCGCCGTC CGAAAGCCTT CTCTGCCATC ATCATGGTCA CGGGCGTGTT ATTCGCCATT 
CCTAGCCTTG CCCTTTTTGC TCTTTTGATC CCGTTGATGG GAATCGGGAC TGGGCCGGCA 
ATAACGGGTC TCTCAGCTTA CTCCCTGATG ATCTTGATCC GCAATATTGC GGTCGGTTTC 
CAATCGATTC CTGCAGACGT TCTCGAAGCC GCTCATGGGA TGGGATACGG AACTCCGCGC 
CGGCTGTGGG AGGTCGAGCT TCCTTTGGCG ATGCCCTTTA TCGTTGCTGG TATCCGAATT 
GCGACGGTAA CGGTTGTCGG GATTGCCACT GTCGCCGCCT ATATCAACGC GGGTGGGCTT 
GGAGCGATCA TATTTGAGGG GATCGATCAA CGTTTCCCGG AAAAAATCAT TATCGGCGGC 
CTCCTGACGT CGGCGCTCGC TCTGCTGTCC GATTTTGTGC TTTCTCGCAT CGAAGCGCAA 
CTATCGCCGA GCCGCAAAGG AAATGCGCCG TGA 

 

Protein sequence

MKWAPRNLDD IFAAVIQHLY LVVSSVGIAL IISLVVGIWV ARRPKAFSAI IMVTGVLFAI 
PSLALFALLI PLMGIGTGPA ITGLSAYSLM ILIRNIAVGF QSIPADVLEA AHGMGYGTPR 
RLWEVELPLA MPFIVAGIRI ATVTVVGIAT VAAYINAGGL GAIIFEGIDQ RFPEKIIIGG 
LLTSALALLS DFVLSRIEAQ LSPSRKGNAP