| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_2965 |
|---|
| Symbol | |
|---|
| ID | 4179724 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | + |
|---|
| Start bp | 3225271 |
|---|
| End bp | 3226113 |
|---|
| Gene Length | 843 bp |
|---|
| Protein Length | 280 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 638068849 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_675502 |
|---|
| Protein GI | 110635294 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAATATC ACAAAAATGT CCTGATCACG GGCGCGGCCT CGGGATTGGG AAAAGCGATG
ACGCTGGGCT TGCTTCAGGC AGGCTATCAC GTCTGCGGTG TGGATCGTGA CGAGAAGGCT
CTGGATGATC TCGCGAAATC CACAAACGGG CGATTGAAGA CGCGCGTTGC AAATCTCGCT
GATCCATCCG TGACATCACT GATCGGCGAC ATTGAAGATA GCTTCGGCCC TATCGGGATT
CTCATCAACA ACGCCGGCGT GGGCCAAGGA GCTTGGCGCA AAGATTACCA TGTCAACAAG
CTGCGCTTCT ACGAAATGAC CAAGGCGCAG TGGGAGACGG CAGTGAGCGT TAACGCAACC
GCCGTATTCG TCCTCAGCCG CGACGCCGCC CTCCGAATGA TGACACAGGG CTGGGGACGG
ATCGTGAATG TCACCACAAG CCTGGGCACC ATGCTGCGCC CGGGCTGGGT GCCCTATGGA
CCCAGCAAGG CAGCCGCCGA GGCATTGAGC GCTTGTATGG CTGGCGATCT GGAAGGGACA
GGCGTAACCG TCAATGTCAT GACGCCAGGT GGCATCGCCA ATACCGGGCT CATTCCCGAG
GCGGCTCCCT ATGATCGGGA CAAGTTGATT CAGCCCGAGG TGATGATCCC GCCATTGCTT
TGGCTGCTCT CCGACAGCGC GGCTGAAACG ACTGGCATGC GCATCGTGGC ATCGTCCTGG
GATCGTTCTC TTCCGTGTGA AGCGGCGGCC TCCAGGGCTC TGGCTCCCAT TGGTTGGCGG
GATCTGGCCG TGATGCCGAT CACGCCGGAA GTAGTGGAAA CCGCCTCTGT TGGAGAAGTG
TGA
|
|---|
| Protein sequence | MEYHKNVLIT GAASGLGKAM TLGLLQAGYH VCGVDRDEKA LDDLAKSTNG RLKTRVANLA
DPSVTSLIGD IEDSFGPIGI LINNAGVGQG AWRKDYHVNK LRFYEMTKAQ WETAVSVNAT
AVFVLSRDAA LRMMTQGWGR IVNVTTSLGT MLRPGWVPYG PSKAAAEALS ACMAGDLEGT
GVTVNVMTPG GIANTGLIPE AAPYDRDKLI QPEVMIPPLL WLLSDSAAET TGMRIVASSW
DRSLPCEAAA SRALAPIGWR DLAVMPITPE VVETASVGEV
|
|---|
| |