| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_2774 |
|---|
| Symbol | |
|---|
| ID | 4182103 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | - |
|---|
| Start bp | 3021585 |
|---|
| End bp | 3022577 |
|---|
| Gene Length | 993 bp |
|---|
| Protein Length | 330 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 638068662 |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_675315 |
|---|
| Protein GI | 110635107 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.746716 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATGTCG TAAGAGGGAA GGCGAGGCGA AAGCGCGTGC TGGTGGCAGG CGGAGCCGGC
TTTGTGGGGT CGCATCTTTG CGATGCGCTG CTGGCCGAGG GCTGCAAGGT CGTATGCGTC
GACAGTTTCC TGACGGGAGC CTATGCCAAT ATCGCTCCGC TGGAAAACCA TGGGAGATTT
CAGCTTATTC GGCAGGATAT CTGTAAGCCG CTCAAGCTGG AGGACAAGCT GGATGAGATC
TACAATCTCG CATGTGCGGC CTCTCCGCCG ATCTACCAGA TGGACCCTGT CCATACCCTG
ATGACAAGCG TGCTGGGCAC GCGGAACCTG CTTGCGCTGG CGGAAAAACA CGGTGCCCGC
TTCCTGCAGG CCTCCACAAG CGAGGTCTAC GGCGACCCCG AAGTCCATCC GCAGCCGGAA
GATTACCGCG GCAATGTCAA CCCGACAGGA CCGCGGGCCT GCTATGACGA GGGAAAACGC
GCTGCAGAGG CACTCTGCTT CGATCTTCTT CGCCTCGGGC GGGTGGATGC GCGCGTGGCG
CGGATTTTCA ACACCTATGG ACCGCGCATG AAGGCCGATG ACGGCCGTAT TGTCTCAAAT
TTCATCAACC AGGCGCTTCG GGGTGAGCCG CTTACAATCT ACGGAACGGG CGAGCAGACA
CGCTCTTTCT GCCATGTATC GGATCTCGTC AGAGGCCTTG TCGCCTTGAT GGAAGTGCAG
CCCAACCCGA AAATGCCGAT CAATCTCGGC AATCCCGGAG AATTCACCGT CAATCAGCTC
GCCGCGATCA TCAGCGAGAG CGTTCCGGGA GCGAAAGGCG TGATCCATCG TCCGCTGCCG
CAGGACGATC CCCAGCGCCG GCAGCCAGAT ATTAGACGCG CGGAGAAATT GCTGAATTGG
TCTCCCCGAA TTGCGCTGCG GGAAGGTCTG GAGGATACGA TTGCTTGGTT TCGGCTCGCC
GACGAAGCGG AGAAACGCAC TACGGCTGCT TGA
|
|---|
| Protein sequence | MDVVRGKARR KRVLVAGGAG FVGSHLCDAL LAEGCKVVCV DSFLTGAYAN IAPLENHGRF
QLIRQDICKP LKLEDKLDEI YNLACAASPP IYQMDPVHTL MTSVLGTRNL LALAEKHGAR
FLQASTSEVY GDPEVHPQPE DYRGNVNPTG PRACYDEGKR AAEALCFDLL RLGRVDARVA
RIFNTYGPRM KADDGRIVSN FINQALRGEP LTIYGTGEQT RSFCHVSDLV RGLVALMEVQ
PNPKMPINLG NPGEFTVNQL AAIISESVPG AKGVIHRPLP QDDPQRRQPD IRRAEKLLNW
SPRIALREGL EDTIAWFRLA DEAEKRTTAA
|
|---|
| |