| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_2321 |
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| Symbol | |
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| ID | 4180051 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008254 |
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| Strand | - |
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| Start bp | 2474410 |
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| End bp | 2476845 |
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| Gene Length | 2436 bp |
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| Protein Length | 811 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638068214 |
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| Product | conjugal transfer ATPase TrbE |
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| Protein accession | YP_674874 |
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| Protein GI | 110634666 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3451] Type IV secretory pathway, VirB4 components |
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| TIGRFAM ID | [TIGR00929] type IV secretion/conjugal transfer ATPase, VirB4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCTCG CTGAATACCG CCGCACCGCG CGCCGTCTGG CAGATTTCCT GCCTTGGGCG
GCGCTCGTCG GCGAGGGCGT TGTGCTCAAC AAGGATGGCA GCTTCCAGCG CACGGCACGG
TTTCGCGGTC CTGATCTGGA TTCGGCCGTC GCGGCCGAGT TGGTCGCAGT CGCCAGTCGT
CTCAACAACG TCTTTCGCCG TCTCGGGTCG GGCTGGGCGA TCTTCGTCGA GGCACAGCGG
CACGAGGCCG CGACCTATCC AGAGAGCCGA TTTCCGGATG CCGCGTCGGC GTTGGTCGAT
GCCGAGCGCA AGGCTGATTT CGAGGAAGCC GGCGCGCACT ACGAGTCGAG CTACTTCCTG
ACGTTTCTCT ATCTGCCGCC GGCCGAGGAT GCCGCCCGTG CAGAAAGCTG GCTTTACGAG
GGCCGCGAGC AAACGGGCGT CAATCCGCAT GAGAGTCTTG CAGCCTTCGT CGACCGCACC
GACCGCGTGC TGGCATTGCT CGACGGTTTC ATGCCGGCGT GCCGCTGGCT CGACGACAGC
GAGACGCTGA CCTTTCTGCA TTCGACCATC TCGACCAGGC GCCATCGCGT GCGCGTGCCC
GAGACGCCGA TGTATCTCGA CGCGCTGCTC GCTGATCAGC CGCTGACCGG CGGGCTGGAG
CCGCGCCTTG GCGATCAGCA TCTGCGAATC CTTACCATCG TCGGCTTTCC GACCGCGACC
ACACCCGGCA TCCTCGACGA GCTGAACCGG CTGGCGTTCC CATATCGGTG GTCGACACGG
GCGATCCTGC TCGACAAGGT CGACGCGACA AAGCTGCTCA CGAAGATCAG GCGGCAGTGG
TTCGCCAAGC GCAAATCGAT CGCCGCGATC CTCAAGGAGG TGATGACCAA CGAGGCCTCC
GCGCTGGTTG ATACCGATGC GGCCAACAAG GCGGCGGATG CCGACATGGC CCTGCAGGAG
TTGGGCGCCG ACTATGCCGG GCAAGCCTAC GTCACGGCCA CCGTCACCGT CTGGGACGGC
GACCCGCGCA TCGCCGACGA GAAATTGCGG CTGGTGGAGA AGGTCATCCA GGGCCGCGAC
TTCACCGCGA TGCCCGAGAC CATCAACGCG GTCGATGCGT GGCTCGGCTC GCTGCCGGGA
CACGTCTACG CCAACGTCCG GCAGCCCCCG GTCTCGACGC TCAATCTCGC CCACATGATC
CCCCTGAGTG CCGTGTGGGC GGGGCCGGAA CGGGACGAGC ATTTCGGTGC TCCCCCCTTG
CTCTACGGCA AGACCGAAGG CTCGACCACG TTCCGGCTTT CCCTGCATGT CGGCGACGTA
GGGCACACCC TCGTCGTCGG TCCGACCGGC GCCGGGAAGT CGGTGCTGCT CGCGCTCATG
GCGCTTCAGT TCCGCCGCTA CGCAGGAAGC CAGATCTTCG CTTTCGATTT CGGGGGATCG
ATCCGCGCCG CCGCGCTCGC CATGGGCGGG AACTGGCACG ATCTCGGCGG CGGTCTCAGC
GAGGGCACGG AGACGTCCGT TTCTCTCCAG CCGCTCGCCC GCATCCACTA CACGTCTGAG
CGTGCCTGGG CCGCCGACTG GATCGTTGCG ATCCTCATGC GCGAGGGCGT TTCGATCACT
CCCGAGGTCA AGGAACATCT TTGGGCGGCA TTGACCTCGC TGGCGTCCGC GCCGCTCGAT
GAGCGCACCA TCACCGGCCT CGCGGTGCTG CTGCAATCCA ACGATCTCAA GCAGGCGCTA
CGGCCCTATT GCGTCGGCGG TCCCTACGGC CGGCTGCTCG ACGCGGAGTC CGAGCATCTC
GGCAGCGCGA CTGTTCAGGC GTTCGAGACC GAGGGGCTGA TCGGCACCGG CGCGGCGCCG
GCCGTGCTCT CCTATCTCTT CCACCGCATC GGCGACCGGC TCGACGGAAG TCCGACGCTG
CTGATCGTGG ACGAGGGATG GCTGGCGCTC GACGATGAGG GCTTCGCCGG CCAGCTTCGC
GAATGGCTGA AGACGCTCCG CAAGAAGAAC GCTTCCGTCG TCTTCGCCAC GCAATCGCTC
AGCGACATTG ACGACAGCAA GATCGCGCCG GCGATCATCG AGAGCTGCCC GACCCGACTG
CTGCTGCCGA ACGAACGCGC CATCGAACCG CAGATTACCG CCATCTACAG ACGCTTCGGC
CTCAATGGCC GACAGATTGA AATCCTCGCT CGGGCGACAC CGAAACGGGA CTATTACTGC
CAGTCCCGCC GCGGCAACCG GCTGTTCGAG CTGGGCCTTT CCGAAGTCGC GCTGGCGCTC
TGCGCAGCAT CATCAAAAGC CGATCAAACC GCCATCCAGG CGATCCTGGC TGAAAATGGC
CGTGACGGCT TCCTCGCCGC GTGGCTGCGC GCCCGCGATG TCGCCTGGGC CACCGACCTC
ATTCCCGACC TCACCAACCT AGAGACCAAA CCATGA
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| Protein sequence | MNLAEYRRTA RRLADFLPWA ALVGEGVVLN KDGSFQRTAR FRGPDLDSAV AAELVAVASR
LNNVFRRLGS GWAIFVEAQR HEAATYPESR FPDAASALVD AERKADFEEA GAHYESSYFL
TFLYLPPAED AARAESWLYE GREQTGVNPH ESLAAFVDRT DRVLALLDGF MPACRWLDDS
ETLTFLHSTI STRRHRVRVP ETPMYLDALL ADQPLTGGLE PRLGDQHLRI LTIVGFPTAT
TPGILDELNR LAFPYRWSTR AILLDKVDAT KLLTKIRRQW FAKRKSIAAI LKEVMTNEAS
ALVDTDAANK AADADMALQE LGADYAGQAY VTATVTVWDG DPRIADEKLR LVEKVIQGRD
FTAMPETINA VDAWLGSLPG HVYANVRQPP VSTLNLAHMI PLSAVWAGPE RDEHFGAPPL
LYGKTEGSTT FRLSLHVGDV GHTLVVGPTG AGKSVLLALM ALQFRRYAGS QIFAFDFGGS
IRAAALAMGG NWHDLGGGLS EGTETSVSLQ PLARIHYTSE RAWAADWIVA ILMREGVSIT
PEVKEHLWAA LTSLASAPLD ERTITGLAVL LQSNDLKQAL RPYCVGGPYG RLLDAESEHL
GSATVQAFET EGLIGTGAAP AVLSYLFHRI GDRLDGSPTL LIVDEGWLAL DDEGFAGQLR
EWLKTLRKKN ASVVFATQSL SDIDDSKIAP AIIESCPTRL LLPNERAIEP QITAIYRRFG
LNGRQIEILA RATPKRDYYC QSRRGNRLFE LGLSEVALAL CAASSKADQT AIQAILAENG
RDGFLAAWLR ARDVAWATDL IPDLTNLETK P
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