Gene Meso_2250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_2250 
Symbol 
ID4181368 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp2404323 
End bp2405966 
Gene Length1644 bp 
Protein Length547 aa 
Translation table11 
GC content64% 
IMG OID638068145 
Productcbb3-type cytochrome c oxidase subunit I 
Protein accessionYP_674805 
Protein GI110634597 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3278] Cbb3-type cytochrome oxidase, subunit 1 
TIGRFAM ID[TIGR00780] cytochrome c oxidase, cbb3-type, subunit I 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATCGCGC AGCTTACCAT TGCCGAGAGA CAAGTCGGCT TGGCCCTTGC CGGGCTCGTC 
ACCCTCATGG GCGCCGCGCT CGGCATTGCC GGACGCAACG ACGTGCTGGG CTATCAGGGT
CTGCTGATCG TAGTCTTCGG CGCGCTCGTC ATGATCACGC TTCTGCGCAA CCTCGACGCA
CCCGAGCCGG ACGAGAGCCG GCTTGCCGAA TATTACGACG ACCCGATCCG CGTCGGCATC
GTGCTGACGA TGCTGTGGGC CATCTTTGGC ATGTTCATCG GCGTGTGGGT GGCCGCACTT
CTGGCCTGGC CAGAGCTGAC CTTTGATGCG GCCTGGGCGA GCTTCGGGCG CCTGCGCCCG
GCGCACACGA CAGGCGTCAT CTTCGGCTTC GGCGGCAACG CGCTGATCGC CACTTCGCTG
CATGTCGTGC AGCGCACCTC GCGCGCCCGC CTGCCCGACC AGGTCAGCCC CTGGTTCGTG
CTGCTCGGCT ACAACCTCTT CTGCCTGCTC GCCGTCTCCG GCTATTTCCT CGGCATCACG
CAGTCGAAGG AATATGCCGA GCCGGAATGG TATGCCGATA TCTGGCTGGT CGTCGTATGG
GTCGCCTATT TCGCGCTCTA TATCCGCACG CTCGCCCGCC GCAAGGAGCC GCACATCTAT
GTGGCGAACT GGTACTTCAT GGCCTTCATC CTGGTCGTGG CGGTCCTGCA CATCGTCAAC
AACCTCGCCG TGCCCGTCTC CTTCGGCAGC GCCAAGGCCT ATTCCGCCTT TTCCGGCGTG
CAAGACGCGA TGACGCAGTG GTGGTACGGC CACAACGCCG TCGCCTTCTT CCTCACCGCC
GGCTTCCTGG GCATGATGTA CTACTACCTG CCGAAGCGTG CCGAGCGGCC GATCTATTCC
TACCGGCTGT CGATCATCAG CTTCTGGGGC ATCACCTTCA TGTATATGTG GGCGGGCTCG
CACCACCTGC ACTACACCGC CCTGCCCCAC TGGGTGCAGA CGCTGGGCAT GACCTTCTCG
GTGGTGCTGC TCGTGCCTTC CTGGGCCTCG GCCGCCAACG CGCTTCTCAC CCTCAACGGC
GCCTGGCACA AGGTGCGCGA CGATGCCACG CTGCGCTTCA TGATGGTGGC CGCCGTCTTC
TACGGCCTGT CCACCTTCGA AGGCTCGTTC CTCGCAATCC GCGCAGTGAA CTCGCTCTCG
CACTACACCG ACTGGACCGT CGGGCACGTC CATGCCGGCG CGCTCGGCTG GGTGGCGATG
ATCACCTTCG GCGCGCTGTA TACGCTGACG CCGGCCATGT GGAAGCGCCC GCGCATGTAC
TCCAACACGC TGGTGGAGGT GCACTTCTGG TGCGCGGTGA TCGGCACGCT GATCTACGTC
TTCGCCATGT GGAATTCCGG CATCATCCAG GGGCTGATGT GGCGCACCTA CAATGAGAGC
GGGACGCTGA CCTACTCCTT CATCGAATCG CTGATCGCCA TGCACCCCTA TTACATCGCG
CGCACCGTCG GCGGGCTCTT CTTCCTGATC GGCGCGGTGG TCGGCACCTA CAACATCTTC
ATGACGATCC GGCACGAGCC GCTGCCGCTC AGCCAGCAGG CGGAACCACT CGGCGCCGAC
CGTCCGCTCG TGCCGGGGGA GTAA
 
Protein sequence
MIAQLTIAER QVGLALAGLV TLMGAALGIA GRNDVLGYQG LLIVVFGALV MITLLRNLDA 
PEPDESRLAE YYDDPIRVGI VLTMLWAIFG MFIGVWVAAL LAWPELTFDA AWASFGRLRP
AHTTGVIFGF GGNALIATSL HVVQRTSRAR LPDQVSPWFV LLGYNLFCLL AVSGYFLGIT
QSKEYAEPEW YADIWLVVVW VAYFALYIRT LARRKEPHIY VANWYFMAFI LVVAVLHIVN
NLAVPVSFGS AKAYSAFSGV QDAMTQWWYG HNAVAFFLTA GFLGMMYYYL PKRAERPIYS
YRLSIISFWG ITFMYMWAGS HHLHYTALPH WVQTLGMTFS VVLLVPSWAS AANALLTLNG
AWHKVRDDAT LRFMMVAAVF YGLSTFEGSF LAIRAVNSLS HYTDWTVGHV HAGALGWVAM
ITFGALYTLT PAMWKRPRMY SNTLVEVHFW CAVIGTLIYV FAMWNSGIIQ GLMWRTYNES
GTLTYSFIES LIAMHPYYIA RTVGGLFFLI GAVVGTYNIF MTIRHEPLPL SQQAEPLGAD
RPLVPGE