Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_2024 |
Symbol | |
ID | 4182936 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | - |
Start bp | 2175635 |
End bp | 2177041 |
Gene Length | 1407 bp |
Protein Length | 468 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638067920 |
Product | beta-lactamase |
Protein accession | YP_674582 |
Protein GI | 110634374 |
COG category | [V] Defense mechanisms |
COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.770914 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGGAGAA CTCTTTCCAT CACCAAGTGG GTTTTGAGCC TCGTCATCCT GGTTGCGGCA GTGGCAGCCC TTTGGTTCTG GTACACCCCG CCCGAACTGA TCCGCGTCGG CTCCAATTAT GCGGCCAAGA TCATCTGTTC CAACGTTTTC CTTGCCAATC GCGATCCTTC GGCGGTGCTG GACGAAGATG TGCAGGCGCC GGGCAACCCG CTTCTCAGGC TGATGCGCGT TGAGGTCGAT GCCGCCCATG CTACGGTGCG CACCGGCCTT TTCGGATCGA TCGGCGATGG ACTTGCTCTT TTTCGCGGGG CAACAGGATG CGCCGCCGTG CCGGACGGGG ATCTGGCGGC AGCGCGCGGC ATCGTCGCGG ATCTGCCGAC CGCCACGGGC AACGTGGAAC TTTGGCCGGC GGGAGACCGT ATCGAAGTCT CGGCCAACCC TGCCATGGCA GAGGTTCTCG ACGATCCAGG CATGACCGGG CCGGGCATGC GCGCCATCGT GATCGTGCGC GACGGGCGGA TCATCGGCGA GCGGTTCGGG CCGGGTGTGG AGGGATACGA CCAGCCGCTT ATCGGCTGGT CCATGACGAA AACGGTGAAC GCGGCCATTG TCGGGACGCT GGCCGGGGCG GGAAGACTTT CGGTCGAGGA GGGGAACCTT CTTCCCCAAT GGGCGGGTGA CAGCCGGGCA GAGATAACGC TGGCTCAATT GCTCGGCATG GAGAGCGGGC TTGCCTTCAA CGAGAATTAC GGAAACGTCA GCGACGTCAC GCGCATGCTC TTCCTGGAGC CGGACATGGC GGCCTTCGCG GCCAACCAGC CGCTGCTTTA CCGGCCAGGA ACGCATTTTT CCTATTCGAG CGGCGCCAGC GTGATTGTCT CTCGCATATG GCAGAACGCC TTTGAAAATC CGGAGGAGGC GTTCGCATGG CCGCGTGAGG CGCTGTTCGA ACCCATCGGG ATGAACACGG CCGTTTTCGA GACCGATGCG CGGGGCACCT TCGTCGGTTC CTCCTATCTC TATGCTTCCG CACGCGACTG GGCGCGCTTC GGCCAGTTGC TTCTACAGGA CGGGGTCTGG AACGGCCGGC GCATCCTGCC GCAAGGCTGG GTGGAATGGA TGGCCAGGCC GACGGAGGCT TCCGACGGCG ATTATGGCAG GGGCGTCTGG CTGCACGGAC CGCGCGTCGG GTTTTCACCC AGCCCAGACC CCGATGCCGG GTTCGACCTG CCGCAGGATA CCTATTGGCT GATCGGCCAT GACGGTCAGG TGATTGCGAT CATTCCTTCA CGGCGGCTTG TTGTCGTGCG CATGGGTCTG ACACCCTCAA AGCTCGCCTA TAAGCCTCAG GCGCTGGTGG AGGCAATGGT GAAGGTGCTG GATGCGGAAA GTGGCGGGGA CGATTAG
|
Protein sequence | MRRTLSITKW VLSLVILVAA VAALWFWYTP PELIRVGSNY AAKIICSNVF LANRDPSAVL DEDVQAPGNP LLRLMRVEVD AAHATVRTGL FGSIGDGLAL FRGATGCAAV PDGDLAAARG IVADLPTATG NVELWPAGDR IEVSANPAMA EVLDDPGMTG PGMRAIVIVR DGRIIGERFG PGVEGYDQPL IGWSMTKTVN AAIVGTLAGA GRLSVEEGNL LPQWAGDSRA EITLAQLLGM ESGLAFNENY GNVSDVTRML FLEPDMAAFA ANQPLLYRPG THFSYSSGAS VIVSRIWQNA FENPEEAFAW PREALFEPIG MNTAVFETDA RGTFVGSSYL YASARDWARF GQLLLQDGVW NGRRILPQGW VEWMARPTEA SDGDYGRGVW LHGPRVGFSP SPDPDAGFDL PQDTYWLIGH DGQVIAIIPS RRLVVVRMGL TPSKLAYKPQ ALVEAMVKVL DAESGGDD
|
| |