Gene Meso_2013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_2013 
Symbol 
ID4182806 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp2161572 
End bp2163296 
Gene Length1725 bp 
Protein Length574 aa 
Translation table11 
GC content62% 
IMG OID638067909 
Productpenicillin-binding protein, transpeptidase 
Protein accessionYP_674571 
Protein GI110634363 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0768] Cell division protein FtsI/penicillin-binding protein 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.744065 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCTTC TTCCCTGGCG TTTCAAGCGC TCCGCGCCGA CTGCGGAGCA AGCTTCGATC 
GTGCTGCAGG GGCGGCGAAA GGCGACGTCC GGCCGGGCGC AGAGCCGCAT TGTCCTGGCG
ATGGCCATGA TCCTCGGCAT TTACGGTGCG ATCGGCGCCA GGCTTGTGCA TCTGGGGCTG
ATTGAGGAGG CACCCGTCAA CCTGCCGCAA ACAAGACCCA CTGCCTCGCG GCCCGATCTG
CTCGACCGGA ACGGCGAAGT GCTCGCCACC GACATCAAGA CATCTTCGCT CTTCGCGGAG
CCTCGCCACA TCATCGATAT CGATGAGGTG ATCGAGAAGC TGCAAAAGGT GCTGCCGGAC
CTCGACTATG AGCAGACCTA CCGCAGGCTC GACAGCGATG CCGGCTTCGT CTGGCTGCGC
CGGCAGCTTT CGCCGCGTCA GCAGAGCGAT ATCCTGGCGC TGGGTATCCC CGGCCTCGGT
TTTCGCACCG AGAAGACCCG CTTTTATCCC GGCGGCGCGA CCGCTTCGCA CATCCTGGGG
CTGGTCAACA TCGATAACAA GGGCATCGCC GGCATGGAGC AATATGTCGA CGATCAGGGC
CTGGCGGATC TTCAGGCCTT GGGCCTCGCC GGACCGGACA CGCTCGAACC CGTTCGCCTC
TCCATTGATC TGAGAGCGCA ATACATCCTT CACGACGAGC TCTCCCAGGC CATGGACCGC
TATCACGCGA TCGCGGCGGG CGGCGCAATC CTCAATGCGC GCACCGGCGA GGTGGTGGCG
ATGGTCTCGC TCCCGGACTA CGATCCCAAC AATCCCTATA ACGCGCTTGA GAAGGACCGG
ATCAACCGCA TGACGGCGGG CGTGTTCGAA ATGGGGTCCA CGTTCAAGCT CTTCACGACG
GCCATGGCGC TCGATTCCGG GCATGTCAAA ATGACCGACC GTTTCGACGC GTCGCGTCCG
CTGCGCCTCG GCGGTTTCAC CATCAATGAC TTTCACGGCA AAGGGCGTGT GCTGTCTGTG
CCGGAGGTGT TCATCTATTC CTCCAATATC GGCACGGCGA AGATGGCCGA TGTGGTCGGC
ATTGAAGGGC ACCGCGCATT TCTCAAGAAG GTCGGCCTTC TCGACAAGAT GAAGACCGAG
CTGCCCGAGG TTGCTCAGCC GACCGAGCCC AAGGTGTGGA AGAAAATCAA TTCCGTGACC
ATTTCCTTCG GCCACGGTGT GGCCACCACG CCGCTTCAGA CGGCGGTTTC CGCGGTCGCC
ATGGTCAATG GCGGCAAGCT CATTCCGCCC ACCTTCCTGC CGCGCACCGA GGAAGAAGCG
CAGGCCGTCG CCACCCAGGT GATCTCGCCG GAAACCAGCG CCCAGATCCG TTACCTCTTC
CGCCTCAACG TGCAGAAGGG AACGGGCGGC TCCGGTTCGC GCGCCGATGT GCCCGGCTTT
TATGTGGGCG GCAAGACCGG CACCGCGGAG AAGGTGGTCA ACGGCCGTTA CTCAAACGAC
AAGCGCTTCA ACGCCTTCCT CGCGGCCTAT CCGATCAACG ATCCGGAATA TGTCGTTGTG
GTCATTTTGG ACGAACCGAA GGGCGAAAAA CCCGGCATGT CCGCCACATC CGGCCTCAAT
GCCGCACCAG TTGTGGGGAA TGTTATCCGG CGTACCGCGC CGCTACTTGG CGTGGAGCCG
GATTTCAGCC ATGAAAGTGA CGCTTTGCTG GTCTCCTACC GGTGA
 
Protein sequence
MKLLPWRFKR SAPTAEQASI VLQGRRKATS GRAQSRIVLA MAMILGIYGA IGARLVHLGL 
IEEAPVNLPQ TRPTASRPDL LDRNGEVLAT DIKTSSLFAE PRHIIDIDEV IEKLQKVLPD
LDYEQTYRRL DSDAGFVWLR RQLSPRQQSD ILALGIPGLG FRTEKTRFYP GGATASHILG
LVNIDNKGIA GMEQYVDDQG LADLQALGLA GPDTLEPVRL SIDLRAQYIL HDELSQAMDR
YHAIAAGGAI LNARTGEVVA MVSLPDYDPN NPYNALEKDR INRMTAGVFE MGSTFKLFTT
AMALDSGHVK MTDRFDASRP LRLGGFTIND FHGKGRVLSV PEVFIYSSNI GTAKMADVVG
IEGHRAFLKK VGLLDKMKTE LPEVAQPTEP KVWKKINSVT ISFGHGVATT PLQTAVSAVA
MVNGGKLIPP TFLPRTEEEA QAVATQVISP ETSAQIRYLF RLNVQKGTGG SGSRADVPGF
YVGGKTGTAE KVVNGRYSND KRFNAFLAAY PINDPEYVVV VILDEPKGEK PGMSATSGLN
AAPVVGNVIR RTAPLLGVEP DFSHESDALL VSYR