Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_2000 |
Symbol | lpxC |
ID | 4182087 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | - |
Start bp | 2144930 |
End bp | 2145913 |
Gene Length | 984 bp |
Protein Length | 327 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 638067896 |
Product | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase |
Protein accession | YP_674558 |
Protein GI | 110634350 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase |
TIGRFAM ID | [TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.68393 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGACACG GGCAAAGGCT GTGGGCAAGC TCGCTGGGGG TAGAATTGCT GGAATATCAA ACGACTCTCA AGTCGCGCTT TACGCTGTCC GGCGTCGGTG TCCACACCGG CAAGGCCGTA TCCATCCATT TCAGTCCCGC CGAAGCTGAT ACCGGCATTG TCTTTCAGCG CATCGATAGT GGCGCGTCTG GAAAGGTGAT CCGCGCCCTC GTATCGGATG TTGGCGCAAC GGACCTTTGC ACTGGCCTCG GCGATCCGGC GGGCGACCAT GTCGCCACCG TCGAGCATCT GATGGCCGCG CTGCTCGGCA TGGGCGTTGA CAATGTCTCG ATCGAGATAG ACGGTCCCGA GGTGCCCATC ATGGATGGCA GCGCCGCGGC TTTTGTCGAC GCTTTTACGC AGACCGGCCT CGTCCAGCTT TCGGAGAAGC GGCGCTATAT TCGCATCGTG AAGCCGGTGC GGTTCGAATC AGGAAGCTCA TGGGCCGAGT TCCAGCCCTA TAACGGCACG CGCTTCGAAG TGGAGATCGA TTTCGAAAGT CCAGCCATCG GGCGCCAGTC CTTCGCCACC GATTTCACGC CCGAGATCTT TAAACGGGAT ATCTCTCGTG CGCGCACCTT CGGTTTCATC AAGGATGTGG AGCGGCTTTG GGCCGCGGGA TATGCGCTTG GCTCTTCGCT CGAAAATTCC GTGGTGATCG GCGAGGATCA CCGCGTGATC AATATGGAAG GGCTGCGTTA CCCGAACGAG TTCGTCCGTC ACAAGATGCT GGACGCCGTG GGCGATCTGG CGCTTGCAGG GGCGCGCTTC ATCGGCTGCT TCCGCTCCTA TCGGGGCGGT CATCGCGTCA ATGCGGCGGC GCTGCGCCAT CTGCTCACAG ACCGTTCCGC GTTCGAAATC GTGGAGGCAA CTCGCGTGGG CCGTGGCCGC GGTGCCGAAA TGATCGCCGT CAACGCGCCG CTATACGCGC CCTGGATGCT TTAG
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Protein sequence | MRHGQRLWAS SLGVELLEYQ TTLKSRFTLS GVGVHTGKAV SIHFSPAEAD TGIVFQRIDS GASGKVIRAL VSDVGATDLC TGLGDPAGDH VATVEHLMAA LLGMGVDNVS IEIDGPEVPI MDGSAAAFVD AFTQTGLVQL SEKRRYIRIV KPVRFESGSS WAEFQPYNGT RFEVEIDFES PAIGRQSFAT DFTPEIFKRD ISRARTFGFI KDVERLWAAG YALGSSLENS VVIGEDHRVI NMEGLRYPNE FVRHKMLDAV GDLALAGARF IGCFRSYRGG HRVNAAALRH LLTDRSAFEI VEATRVGRGR GAEMIAVNAP LYAPWML
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