| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_1936 |
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| Symbol | |
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| ID | 4181944 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008254 |
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| Strand | - |
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| Start bp | 2073331 |
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| End bp | 2074410 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 638067832 |
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| Product | putative spermidine/putrescine transport system substrate-binding protein |
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| Protein accession | YP_674494 |
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| Protein GI | 110634286 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGACGA TTGAACTATC ACGAAGGAAT GCTTTGAAGG TGATCGCAGG ATCGAGTGCT
TTATTAGCCG CGCCGGCGAT ACTCTCACGT TCTTATGCGC AAGAAGGCGG CTTTTCCGTC
GGTATTCCCG GAGGTTACGA GAAGGCTTTC CAGACTGCGT TCCTCGACCC CTATGAGCAG
GAATTCGGGA TTAAGCCGAC GCCCATCCTC GCTGGCACCT CGACCGTCGA GATCAAGGCC
CAAGTCGAGA CGGGCAAGTT CTTCTATGAT GTCCGCTTTA GCGTGGCGGC GACCGGTAAC
GAGGTTCTTG CCGAGGCCGG TCTGCTCGAG CGGATAGACG ACATCGATTC GGAAGATGTC
CAGGCAATCT ATGGTGCCTT GCCGGAAGCA CAGCGTAGGC CGACCTTCCT TCCCCACGGC
TTGTCGGCAC AGGTCATTGC TTTCCAGGAC CATCTGGATT TCAAGGACTA TGCCGATATT
TGGGACGTCG AGAACCTCCC CGGTGCGCGG GCTCTGCGGG GTCAAGGTAA GGATACTATC
GAAGCCGCAC TGCGTTCCAT GGGTAAGCGG CCGAGCGAGA CTGCCTCATT CCTCGCGAAC
GAGGATGGGT GGAAGCAGGT ATTTGCTCGG CTGGACGAGA TAAAGGACCA CGTGACCAAC
TGGTGGGAGG AGGATTCCGA CATCACCCGG CTGCTTGGCG CGCGCGAAGT TGATGTAACT
GCTTTCCCGC ATCACCGAGC AATGGCCGCC GTCCAAAGCG GTGCCAGGAT CAAGTACAAC
TATAGCCAGA GCATGACGAC CGCGCTTGGC TGGGTGATCC CAAAGAACAG CCCACAGGCC
GAGGCGGGAC GCAAATTCAT CGCATTCTGT TCGCGCCCCG ACCGTATTGC CGACTTCACA
ATGGACGTGC CGATGGGGCC GATGCACCCC GATGTCATGG CCCTGCTGGA TCCGGCTTTT
GCGGTAGCTC TGCCCACCCA CCCCAACAAC GTCGAAAACA TTGAATCCGA GGATGTGGCA
TTCTGGCACA AGAATCAGGG CCAAGCCAAC GAGCGCTTTA AGGAGTGGTT ACTCGGATAG
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| Protein sequence | MKTIELSRRN ALKVIAGSSA LLAAPAILSR SYAQEGGFSV GIPGGYEKAF QTAFLDPYEQ
EFGIKPTPIL AGTSTVEIKA QVETGKFFYD VRFSVAATGN EVLAEAGLLE RIDDIDSEDV
QAIYGALPEA QRRPTFLPHG LSAQVIAFQD HLDFKDYADI WDVENLPGAR ALRGQGKDTI
EAALRSMGKR PSETASFLAN EDGWKQVFAR LDEIKDHVTN WWEEDSDITR LLGAREVDVT
AFPHHRAMAA VQSGARIKYN YSQSMTTALG WVIPKNSPQA EAGRKFIAFC SRPDRIADFT
MDVPMGPMHP DVMALLDPAF AVALPTHPNN VENIESEDVA FWHKNQGQAN ERFKEWLLG
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