| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_1782 |
|---|
| Symbol | |
|---|
| ID | 4181333 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | - |
|---|
| Start bp | 1903747 |
|---|
| End bp | 1904913 |
|---|
| Gene Length | 1167 bp |
|---|
| Protein Length | 388 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 638067674 |
|---|
| Product | aminotransferase, class V |
|---|
| Protein accession | YP_674341 |
|---|
| Protein GI | 110634133 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTATGG CCGGACAGCG CATCTATCTC GATTACAATG CTACGGCGCC GCTCAGCGAG
GCTGCTCGGC GCGCGGTGAT CGATGCATTT GACGCGGCGA ATCCCTCCTC CGTGCATGCT
GAAGGCAGGG CGGCGCGGCA GATGGTGGAG GCCGCTCGGC GCGACGTGGC GGCGCTGGTG
AATGGAAAGG CGGCGCATGT GGTCTTCACC TCGGGCGCGA CCGAGGCGGC GGCCATGCTC
CTCTCCCCCG ACTGGACCAT GGGCCGGGCA CCCCTCACTT TCTCGCGGCT TTATGTGAGT
GCGACCGACC ATCCTTGCGT GCTTTCCGGC GGCCGCTTTG CCGCGGAGAC GGTGGAGAAG
ATACCGGTAG GATCGGACGG GATCATTGAT CTTGGCGCGC TTGAGCGCGC GCTGGCCGCT
CATAACGGGA CGGAGGGCCT GCCTCTGGTC GCCAGTCATG TGGCGAACAA CGAGACCGGC
GTGATCCAGC CGATCGAGGA AATCGGTGCG GTGGTGAAGA GGGCGGGTGG AGTCCCGATC
TTCGACGCCG TCCAGGCGGC AGGACGCATT CCTCTCGATT TATCGGCAGG ATATGCCGAC
TTCTTCATTC TTTCCTCGCA TAAGATCGGC GGGCCGAAGG GCGTGGGCGC GGTTGTGGGC
GCGTCCGACC TGATGATGCC CCGCCCCCTG GTGACAGGAG GAGGGCAGGA GAAGGGCCAC
CGCGCCGGAA CGGAAAATGT GGCTGCCATC GCGGGTTTCG GTGCGGCCGC CCGCGAAGCG
GCGGCGGCCG TTTCCGCCAT GGATGGCGTT TGCGCGAAGC GCAGCCGCAT CGAGGCAATC
CTTCGGTCTG TGTTGCCTGA TGCGGTGATC TACTGCGAAA AGGTGCGGCG CCTGCCCAAC
ACTGTCTTCT TTTCCATTCC GGGCATGAAG GCGGAGACGG CGCAGATTGC CTTCGATCTT
GCTGGAATCG CAGTTTCGGC AGGTTCGGCG TGCTCGTCGG GCAAGGTCGG ACCGAGCCAG
GTGTTGCAAG CGATGGGCTT CGGCGATCAG GCCGGCGCAC TTCGTGTTTC GATCGGCGTT
CAGACGACGG ATGCGGAAAT AGAGGCTTTT GCAGAGGCGC TCGAAAAAAT TGTTGCGAAA
CGCAAGATGG CGACCGCAGC AGCTTGA
|
|---|
| Protein sequence | MSMAGQRIYL DYNATAPLSE AARRAVIDAF DAANPSSVHA EGRAARQMVE AARRDVAALV
NGKAAHVVFT SGATEAAAML LSPDWTMGRA PLTFSRLYVS ATDHPCVLSG GRFAAETVEK
IPVGSDGIID LGALERALAA HNGTEGLPLV ASHVANNETG VIQPIEEIGA VVKRAGGVPI
FDAVQAAGRI PLDLSAGYAD FFILSSHKIG GPKGVGAVVG ASDLMMPRPL VTGGGQEKGH
RAGTENVAAI AGFGAAAREA AAAVSAMDGV CAKRSRIEAI LRSVLPDAVI YCEKVRRLPN
TVFFSIPGMK AETAQIAFDL AGIAVSAGSA CSSGKVGPSQ VLQAMGFGDQ AGALRVSIGV
QTTDAEIEAF AEALEKIVAK RKMATAAA
|
|---|
| |