Gene Meso_1709 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_1709 
Symbol 
ID4181339 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp1832052 
End bp1833311 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content60% 
IMG OID638067601 
Productcell wall hydrolase/autolysin 
Protein accessionYP_674269 
Protein GI110634061 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0860] N-acetylmuramoyl-L-alanine amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCGGAAC GGCCGACTCC AAAAGCCATG CGGGCGCATC GCGCGAGGCG AGAAACACGG 
CACGGACCGC ATGCTTCCGG CCCTTTTCTT CTCTTGCTTT TCCTTCTGAC GGCCTTCTGG
GGGCCACCAG CATTCGCCCA AGCGGTTCAA CCGCTTGTCG CCTATGATCA TACGATGGCC
GGTGATGCGA ACCGTGTGCG GATCGTACTC AACTTCGACC GGAAACCGGA AGTCAACTGG
TTTCTCCTGC GCGCGCCGCA CCGGCTGGTG GTGGATTTTC CCGAAACGGA TTTCGGCATC
GAGGAGAAGG AGACCGAGCC CCGGGGGCTG ATCTCACGCG TTCGCTATGG CCGGATGGCG
CCTGGCCATT CGCGGATGAT CTACACCATG CCGGGCCCAT TCAAGGTCGA GGAGGTCTCG
GTGCTGAAAA ACGAGACCTC GCCGGGTTAC CGGATGATCG CCGATATCGT TTCAGCTTCG
GAGAGCGATT TCGAATCGGC AATGCGCGAG CGCCTTGCCG CTGCGCCAGA TGCAGGAACT
GCAAAGGAAG TGGTGAAGCA AAAGCCGACG GATGACCGCT TCATGATAGC GATCGATCCC
GGCCACGGCG GAATCGACGG GGGAGCGCGC GGCGTGAGCG GCACCTTCGA AAAGACGATT
ACCCTTACTT TTGCTCAGGA ACTCAAGAAG AGCCTCGAGG CAACCGGCAA ATACAATGTC
GTGCTTACGA GAAACGAAGA CGTTTTCCTG CGGCTCGACG AGCGGGTGCG AATTGCGCGC
GAGAACGAGG CCGACCTTCT CATTTCCATC CATGCCGATG CGATTTCAAT GCGCGATTTC
CGCGGCGCCA CGGTTTATAC CTTGTCGGAT CGGGCCTCCG ACGCGGAGGC GGCGGCAACG
GCTGCACGGG AAAACCTCTC CGACGAGCTC GCGGGCTTGA CGGCAGAGGA GGAGCAGGAC
CATGTCGCCG ACATTCTATT CGACCTCATT CGCCGGGAGA CGCACGCCTT CTCCATCCAT
TTTGCCCGCA CCTTGCTCGA CAGCCTCGGC GAGACGGTGC ACCTGGTCGG CAATCCCCTG
CGTTCAGCAG GTTTTCTCGT TCTCAAGGCG CCGGATGTGC CCTCCGTTCT CGTTGAGCTC
GGCTATCTGT CAAATCCGGA AGACGAGAAA CAGATGAAGG ACCCGGCCTG GCGCGCGAAG
GCAGTCGATT CGATCCTTCG GGCGATCAAC ATATTCGCTG CCGCGAGGGC GGGTGGATAA
 
Protein sequence
MAERPTPKAM RAHRARRETR HGPHASGPFL LLLFLLTAFW GPPAFAQAVQ PLVAYDHTMA 
GDANRVRIVL NFDRKPEVNW FLLRAPHRLV VDFPETDFGI EEKETEPRGL ISRVRYGRMA
PGHSRMIYTM PGPFKVEEVS VLKNETSPGY RMIADIVSAS ESDFESAMRE RLAAAPDAGT
AKEVVKQKPT DDRFMIAIDP GHGGIDGGAR GVSGTFEKTI TLTFAQELKK SLEATGKYNV
VLTRNEDVFL RLDERVRIAR ENEADLLISI HADAISMRDF RGATVYTLSD RASDAEAAAT
AARENLSDEL AGLTAEEEQD HVADILFDLI RRETHAFSIH FARTLLDSLG ETVHLVGNPL
RSAGFLVLKA PDVPSVLVEL GYLSNPEDEK QMKDPAWRAK AVDSILRAIN IFAAARAGG