| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_1608 |
|---|
| Symbol | |
|---|
| ID | 4180125 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | + |
|---|
| Start bp | 1731238 |
|---|
| End bp | 1732773 |
|---|
| Gene Length | 1536 bp |
|---|
| Protein Length | 511 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 638067500 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_674168 |
|---|
| Protein GI | 110633960 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.195051 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACACCGC TCCTGGAAGT CCGCGGCGCC ACGAAAGCCT TTCCGGGCGT CAAAGCACTC
GATGGGGTGA ACCTGACTTT GCGTGCGGGC GAGATCCACG CGCTCGTGGG CGAGAACGGC
GCTGGGAAGA GTTCGCTGAT AAAGCTTCTG ACGGGGGTGC TGCGACAGGA CGAAGGCGAG
ATACGCCTCA ATGGCGAGCC GGTGAAATTT AACTCGCCGC ACGAGTCTCT CGCGGCCGGC
ATCGCTGTGG TGCATCAGGA GCGCAATCTC ATTCCGCGCT ATTCGATCGC CGAGAACATG
TTCCTCGACC GTCTGCCTGT GCGCAACGGC CTGGTGCAGC ACGCGCAAAT GCGGCGGGAA
GCACAGCCCT GGCTCGATCT CCTCGACCTC CACATTAATC CGGGAACACC GGTGCGCTAC
CTCTCGGTCG CGCAGATGCA GCTTGTCGAG ATAGGGCGCG CGCTGTCGCT CGACAGCAAG
ATACTGCTGC TTGACGAGCC TACCGCTTCC ATCAGCGAAC ACGAGGTGGA ACGCCTTCTC
ACCATCCTCA GGCGATTGCG CGACCAGGGC AAGGCGATCC TGTTCGTCAG CCATAAGCTC
GAAGAGCTGA CCCAATTGTG CGATCGCATC ACCGTCTTGC GGGACGGGAA GAACGCTTGC
GACGACCGGC CGCTCAAGGG GATGACCAAG GCGGATATCG TGACGTTGAT GGTGGGCCGC
GAGAGTGCCG TCACGGACCT TGGCGAGCGG ACGGCAAAGC TCGGCGAAAT CAGGCTCGCC
CTGCGAGACC TGGCGACAGG CGCGGGGCAC AAGGGAATCA ATCTCGACGT CCGCGCAGGC
GAGGTCGTCG GACTCTATGG TCTGGTGGGC GCCGGACGCA GCGAACTCGC AAAGTCGATC
ATCGGAGCTT ATCCCGTCCT GTCGGGCAGG ATCGAGATGG AGGGCCGCCC CGCACGCATA
CGGGCCCCCC TTGATGCCTT GCGCGACTGG CACATCGGCT ATGTTTCCGA GGACCGCAAG
GGCGAAGGTC TGATCCTAAC GCAGTCGGTC GCCCGCAACA CGGCGATTAC GGTCTGGCAT
CGCATTGCGA AGCGGCTCGG GTTTTTGTGG GGCGGGATTG AGAAGGCGGC AATCCTCCCT
TTCGTCGAAC GGCTCAATGT CAAGACGCCG AGCCTCGACC AGGCCGTCGG CAATCTCTCC
GGTGGAAACC AGCAGAAGGT AAGCGTTGCG AAATGGCTCG CAGCCGATGC CCGCATCCTG
ATCATCGACG AGCCGACGGT GGGCGTCGAC GTCCGCACCA AGGGTTATCT GCATCGCCTG
ATCTGGAAGC TTGCCGAAGA TGGAGCCGCG ATCCTGCTGA TTTCGAGCGA GCTGTCGGAG
ATGGTCCAGC TGGCCGACCG CATCTACGTC ATGAATGACT ACCGGATCAT TACGGAAATG
CCGAACTCGC GCCAGTACGA CGAGATGAGT GATCGCCTGA TGACTGCGAT TCACCGGGAC
AATGACGCCC GGACGCAAAG CGCGGCAGCC GAATAA
|
|---|
| Protein sequence | MTPLLEVRGA TKAFPGVKAL DGVNLTLRAG EIHALVGENG AGKSSLIKLL TGVLRQDEGE
IRLNGEPVKF NSPHESLAAG IAVVHQERNL IPRYSIAENM FLDRLPVRNG LVQHAQMRRE
AQPWLDLLDL HINPGTPVRY LSVAQMQLVE IGRALSLDSK ILLLDEPTAS ISEHEVERLL
TILRRLRDQG KAILFVSHKL EELTQLCDRI TVLRDGKNAC DDRPLKGMTK ADIVTLMVGR
ESAVTDLGER TAKLGEIRLA LRDLATGAGH KGINLDVRAG EVVGLYGLVG AGRSELAKSI
IGAYPVLSGR IEMEGRPARI RAPLDALRDW HIGYVSEDRK GEGLILTQSV ARNTAITVWH
RIAKRLGFLW GGIEKAAILP FVERLNVKTP SLDQAVGNLS GGNQQKVSVA KWLAADARIL
IIDEPTVGVD VRTKGYLHRL IWKLAEDGAA ILLISSELSE MVQLADRIYV MNDYRIITEM
PNSRQYDEMS DRLMTAIHRD NDARTQSAAA E
|
|---|
| |