Gene Meso_1604 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_1604 
Symbol 
ID4180121 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp1727241 
End bp1728020 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content58% 
IMG OID638067496 
ProductIclR family transcriptional regulator 
Protein accessionYP_674164 
Protein GI110633956 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.379428 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGTTG GGGGTGTTAA GAAGAGCTCG ACCGTCCTCA AGGCGCTGAA GATGCTGGAG 
GAAATCGGCA ATCACGAGGG CGGGATAGCC TTGTCCGACA TCGCCTCCGT CGTAGAACTC
GATCGCAGTA CGGCCTATCG GCTGCTGACC ACCTTGGTCG ATGCGGGTTT CTTGGTCCGC
TCGGAAGAGA CGAAAAAGTA TGGCCTTACC TACAAACTCA TCTCAATAAG TCGTTTCCTG
TTGGCCAATA CCGGGCCAGA CGACCTCATA CGGTCGAAGC TCGCAGAACT TTCAAGGCTA
ACCCAGGAGG CGGCGAACTT TTCCGTCCTG GATGGCGATC AAGCGGTCAT TCGCCTGCAA
TCGAAGGGCT CTCATCTCCT CTCGGTAGCG TTCAAGATCG GCGACAGGTC GGACCTGCAT
TGCACCTCGA TCGGCAAGGT CCTGCTTGCA CAGCAGAGCG ACCGCTTCAT TCAGCGCTTC
CTGTCGCGTC CGTTGCCGAA GGTTACCCCC CAAACACTGA CGAATCCGGA TGACCTGCTG
CGGGAACTCG AAAAAATTCG CCAGCAAGGC TACGCATTCG ACGTCCGGGA ATTTGCAGAC
GATATGTGCT GCGTGGCAGC CCCGCTCTTC GGCGCCCACG GCAAGCTCTT GGGCGGTATC
AATTTCGCCG GTCCGATCAC ACGCATGAGC CCTGAGCGCA TGCGCGAACT CGCCGCGATC
CTCCAGAAGG CCACGAAAGA ACTATCCGAC GCGATGCGCA GCTCAACCCC AGACGATTAG
 
Protein sequence
MTVGGVKKSS TVLKALKMLE EIGNHEGGIA LSDIASVVEL DRSTAYRLLT TLVDAGFLVR 
SEETKKYGLT YKLISISRFL LANTGPDDLI RSKLAELSRL TQEAANFSVL DGDQAVIRLQ
SKGSHLLSVA FKIGDRSDLH CTSIGKVLLA QQSDRFIQRF LSRPLPKVTP QTLTNPDDLL
RELEKIRQQG YAFDVREFAD DMCCVAAPLF GAHGKLLGGI NFAGPITRMS PERMRELAAI
LQKATKELSD AMRSSTPDD