| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_1563 |
|---|
| Symbol | |
|---|
| ID | 4180101 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | + |
|---|
| Start bp | 1681489 |
|---|
| End bp | 1682202 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 638067455 |
|---|
| Product | polar amino acid ABC transporter, inner membrane subunit |
|---|
| Protein accession | YP_674124 |
|---|
| Protein GI | 110633916 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4215] ABC-type arginine transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.086799 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATGGCG TTCTGACCCT CCTTAGTTTC GGCCCGGCAG GGTGGGGTGA CGAAATCGCC
TTGGGTGTGC TCGTCACCAT TTCGCTGGCG CTCGTGACCC TTCCATTCGG CCTTGCAGCC
GGTTTCACGG TCGCGCTTGC AAAGACATCG GAGGAGCCTA GCCTTAGGCT TGCGGCCAAT
ATCTACACCA CAATTTTCCG CGGCTTGCCT GAGCTATTGA CGCTATTCCT GGTCTTTTAC
GGCGCGCAGA TCGCGGTGCA GCAGATCACG CGCGTTCTGG GCGCAACTGC CACCATAGAG
ATCAACGCTT TCGTGGCCGG TATCGTGGCG CTCGGGGCGG TTTTTTCCGC TTACGCCAGC
GAAGTGTTCG TATCCGCCTT CCGCGCCATT CCGCGCGGCC AATACGAGGG TGCATACGCG
GTGGGGCTTT CCCGCCGGCG CACCATGCAG CTGGTCATCT TGCCGCAACT TATCCGGCTG
GCTTTACCGG GCCTCTCCAA TCTGTGGCTT ATCCTTCTTA AAGAGACTTC GCTGGTGTCT
GTCATCGGGC TTGCCGATAT CCTGCGCCAG ACGGGCATTG CGGCCCGCGT GAGCAAGGAA
GCCTTTCTGT TCTTCGGCAT TGCCTGCCTG CTTTATCTCG GCCTTTCCGT TCTCTCTTCC
TTTGCGTTCT CGGCTATCGA GCGGCGGGTT TCTTCCAGCG GGCCGTCGCG ATGA
|
|---|
| Protein sequence | MNGVLTLLSF GPAGWGDEIA LGVLVTISLA LVTLPFGLAA GFTVALAKTS EEPSLRLAAN
IYTTIFRGLP ELLTLFLVFY GAQIAVQQIT RVLGATATIE INAFVAGIVA LGAVFSAYAS
EVFVSAFRAI PRGQYEGAYA VGLSRRRTMQ LVILPQLIRL ALPGLSNLWL ILLKETSLVS
VIGLADILRQ TGIAARVSKE AFLFFGIACL LYLGLSVLSS FAFSAIERRV SSSGPSR
|
|---|
| |