Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_1091 |
Symbol | |
ID | 4181251 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | + |
Start bp | 1195884 |
End bp | 1197809 |
Gene Length | 1926 bp |
Protein Length | 641 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 638066974 |
Product | TRAP transporter, 4TM/12TM fusion protein |
Protein accession | YP_673653 |
Protein GI | 110633445 |
COG category | [R] General function prediction only |
COG ID | [COG4666] TRAP-type uncharacterized transport system, fused permease components |
TIGRFAM ID | [TIGR02123] TRAP transporter, 4TM/12TM fusion protein |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.768429 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCAGCC AAGCTAAACC GGTCGTCCCT CCCATATTGC TCGTCCTCAC GACCCTTACC GTGCTCTGGC ACGTCGTGAC GATAGCGCAG TTGCCCACTT GGTTCGGCAT CTTCATTCCT CAGGCGTCGA TCCGGGCCAC GAGCCTCGTG CTTGCCGCTG TGCTGATCCT GCTCACCTCC CATGCCGCGA GCGGCCATGA GGGCGAACCG CTTAAGGACG GCGTCCGCTT CCGCTGGCTC GACCTTCTGG TGTTCGCGCC GCTTGCCGCA GGCTGCAGCC TTGTCATTTT CAACTACGAC AAGGTGCTGG ACTACGGCTT CTTCGGTGCG CTCGACACCA CCGGCGTCAT TCTGGCGCTC TGCGTCGCCG TTCCCCTCCT GGAACTCGTG CGCCGCAAGA CTGGGATCGT ATTGCCGATC ATCATCCTGA GCTTCGTCGC CATTGCGATG TTCCAGGCCT ATCTGCCCGG AGTCCTGCAC GGCCGAGGCT ATTCGCTCGA CCGGCTCCGT TACTCTTCCT ATGTCGGCGA ATCCGGGATA TTCGGCGCGC CGCTCGGCAT CGCCGTCAAT ATCGTAATGG TCTACTTGCT GTTCGGCGCT CTGATGGAGA GGGCAGGGGC CAGCCGCTGG TTTATGGATC TCGCGCTCTC ACTCACCGGC CGGTCGAGCG GCGGTCCGGC CAAGGCGTCC GTCGTCGCTT CCGCTATGTT CGGCTCCATC TCTGGCTCGC CCTCGGGCAA CGCCGCCACC ACTGGCGTGT TCACCATTCC GATGATGCGC GAGGTGGGCT ATAAGCCGAG CTTCGCCGCT GCCGTTGAAG CGGTGGCATC GACCGGGGGC ATGATCCTGC CGCCGGTGAT GGGGGCCATT GCCTTCCTCA TGGCCGAATG GATCGGCCGC ACCTATCGCG AAGTCGTCAT CGCGGCGCTG ATCCCGGCGA TCCTCTACTT CATCGTGATC TTCGCGTCGG TGCATTTCGA GGCAAAGCGC TCGGGTATCC GTGCTATGGC GCGCACCGAC CTCCCTGCCT TCTGGAAGAC GCTGCGCAGC GGCTGGTACT ACGCGCTGCC CATGCTGGCG CTGATCTGGT TCCTGATCAT CGCCGCGTTG CCGCCGGGAA TGGCAGGGAT TTATTGCTGC GGCGTGGTTC TGCTCTGCTC GTTCCTGTCG CCCGATCGCT CGCGCTGGCT CCTGCCAAGG CCTCTGCTTC TCGCGATGAA AGACGCAGTG ATGCGCTGGC TCGTCATCGT CGTCATCACC GCTTCCGTCG GCATCATGAT TGGCGCGATG GAACTCTCGG GCGTCGGCCT CAACGTCTCG CGCTTCATCG TCGATATCGG CGGCGGCAAC CTTGTCGTCA CGCTGGTCCT CGTCGGGGCT GTCAGCCTCC TGATCGGCAT GGGACTCGAC GCGACCCCGG CCTACGTGAC GCTCGCCACG CTCATGGCCC CTGCGCTGAT TCAGATGGGC GTTCAGGACA TCGCAGCGCA CCTGTTCGTG GTCTATTGGG GCCTTGCCTC TTTCTTCACA CCGCCAACCT GCATCGCGAT TTTCGTTACC GCTCCGATGG CCGGCGCGAG CGTCTGGGCG GCGGGCTGGC AGGCCGTGCG CCTTGGCATC GCGGCCTTCC TTGTGCCGAT GAGCTTTGCG CTGAACCCCG CCCTGCTCAT GGAGGGGGCC GTCAGAGAGA TCATCCTCGC CACCGGCACC GCGCTGGTTG GTGCAGTCGC ACTTTCCGCG GGTCTTCGCG GCTTCGCATT ACAGCGGCTC AGCGGAGCTG AGCGCGCGCT GATCTCACTC GGCGGTGTTC TCCTGATTGC ACCGGGCATC GCGCCCGCCC TCATTGGGCT GGGCCTCGTC GTCGGAGTGG TGGTCTGGTC GACCTGGCTT CAATCCGTCC GTCCAGTGCG GGAGGGGTCG CCGTGA
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Protein sequence | MSSQAKPVVP PILLVLTTLT VLWHVVTIAQ LPTWFGIFIP QASIRATSLV LAAVLILLTS HAASGHEGEP LKDGVRFRWL DLLVFAPLAA GCSLVIFNYD KVLDYGFFGA LDTTGVILAL CVAVPLLELV RRKTGIVLPI IILSFVAIAM FQAYLPGVLH GRGYSLDRLR YSSYVGESGI FGAPLGIAVN IVMVYLLFGA LMERAGASRW FMDLALSLTG RSSGGPAKAS VVASAMFGSI SGSPSGNAAT TGVFTIPMMR EVGYKPSFAA AVEAVASTGG MILPPVMGAI AFLMAEWIGR TYREVVIAAL IPAILYFIVI FASVHFEAKR SGIRAMARTD LPAFWKTLRS GWYYALPMLA LIWFLIIAAL PPGMAGIYCC GVVLLCSFLS PDRSRWLLPR PLLLAMKDAV MRWLVIVVIT ASVGIMIGAM ELSGVGLNVS RFIVDIGGGN LVVTLVLVGA VSLLIGMGLD ATPAYVTLAT LMAPALIQMG VQDIAAHLFV VYWGLASFFT PPTCIAIFVT APMAGASVWA AGWQAVRLGI AAFLVPMSFA LNPALLMEGA VREIILATGT ALVGAVALSA GLRGFALQRL SGAERALISL GGVLLIAPGI APALIGLGLV VGVVVWSTWL QSVRPVREGS P
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