| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_1020 |
|---|
| Symbol | |
|---|
| ID | 4180534 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | + |
|---|
| Start bp | 1119603 |
|---|
| End bp | 1121615 |
|---|
| Gene Length | 2013 bp |
|---|
| Protein Length | 670 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 638066900 |
|---|
| Product | carbamoyl-phosphate synthase L chain, ATP-binding |
|---|
| Protein accession | YP_673582 |
|---|
| Protein GI | 110633374 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCAAAA AGATACTCAT TGCCAATCGT GGCGAGATCG CCTGCCGCAT CATCAAGACC
GCCCGCCGGA TGGGAATTGC CACGGTCGCG GTCTATTCGG AAGCCGATGC GGATGCCTTG
CATGCGGAGA TGGCCGACGA AGCCGTGGCG ATTGGCCCTG CTCCGGCAAG CCAGAGCTAC
CTCGTGGCCG AGAACATCAT TGCGGCCTGC AAGCAGATCG GAGCCGAGGC CGTGCATCCC
GGTTACGGAT TTCTCTCCGA GAACGCGGAA TTCTGCGAGC GGCTGGAATC GGAGGGCATT
GTCTTCATCG GCCCGAAATC CAAGGCCATC CGCGCCATGG GCGACAAGAT CACCTCCAAG
AAGATCGCGG CGGAAGCGGG CGTATCCACC GTGCCCGGCC ATATGGGGCT GGTGGAGGAT
GCCGGCCATG CCGCCAGGAT TGCCGCTGAG ATCGGCTACC CGGTGATGAT CAAGGCCTCC
GCCGGTGGCG GCGGAAAGGG AATGCGGATC GCCTGGAACG ATGCGGAGGC TCGCGAAGGC
TTTGAGCGCT CGCGCTCGGA AGCCGCCTCG TCTTTCGGCG ACAACCGCAT TTTCATCGAG
AAATTCGTTG AGGAGCCGCG CCATATCGAA ATCCAGGTGC TGGGGGACGG CTTCGGCAAC
TGCATCCATC TGGGCGAGCG CGAATGCTCG ATCCAGCGGC GCAACCAGAA GGTGGTGGAG
GAGGCGCCTT CGCCCTTTCT CGACGCGAAG ACCCGCGCGG AAATGGGCGC GCAGGCCATC
GCGCTGGCCA AGGCGGTGGA TTATCAGAGC GCGGGCACGG TCGAGTTCAT CGTCGACAGC
GAGCGCAACT TCTATTTTCT CGAAATGAAC ACGCGCCTGC AGGTCGAGCA TCCAGTGACG
GAGCTCGTCA CGGGTATCGA TCTCGTCGAG CAGATGATCC GCATCGCCGC CGGAGAGAGA
TTGGAGATCG CGCAGGACGA CGTAAAGCTC AAGGGCTGGG CCATCGAGAG CAGGCTTTAT
GCCGAGGACC CGACGCGCAA CTTCCTTCCT TCGATCGGGC GGCTTGCGCG GTACCGTCCG
CCGGAGGAGG GGCGGAGCGG AGAAACTGTT TTGCGCAATG ACACTGGCGT GACCGAGGGG
TCGGAGATCT CGATGTTCTA CGATCCCATG ATCGCCAAGC TTTGCACCTG GGCACCGGAT
CGCCTCGGCG CGATCGATGC AATGTCGCAG GCATTGGACC GGTTCGTCGT GGACGGCATC
GCCCACAACA TTCCCTTCCT TGCCGCGCTC ATGCGCCATC CCCGCTGGCG TGAGGGGCGG
CTTTCAACCG CCTTCATCGC GGAGGAATAC CCTGACGGCT TCTCGATTCC CGCGGCCGGG
AAGGCAGAGC GCGCGGTGTT CTGCGCAGTG GCGCTTGCAA TCGAACTTAT CCGGCGTGAC
CGCCTCGACC GGCTTCCCGG TCGGCTCGCG CCGCATTCAG GCGTTATGCG GCGCGATTGG
GTGGTGAAGC TGGACCGCGA ATATATTCCG GTATCGTTGG TCGAGGGGAC GGGATCCATC
CCGACCGATT TGAGCATTTC GATAGATGGC GCTGCTCCGG TAACGCTCTC CTCGTCCTGG
CATCCGGGCG AACGGATATG GACGGGGCGG GTAGGGCGCA AGGAAGCGGC CGTGCAGATC
CGCCCTGTGC TGAATGGTCA TGAGCTTTCC TGGCAGGGGG TGGCATCGGT CGTGAAGGTC
ATGACCCCGC GCATAGCCGA GCTCGACAGG CTGATGCCCG AACGCAAAGC CGCCGACATG
TCCAAAAAGC TGCTCTGTCC AATGCCTGGC CTCGTGGTCT CCATCGCCGT GAGCGAGAAT
CAGGAGGTAA AGGCAGGCGA GGTGCTGGCA ATCGTGGAAG CGATGAAGAT GGAAAATGTG
CTGCGCGCGG AGCGTGATTG CACGGTGGCC GCCGTCCTGG CGGCGCCGGG CGATAGCCTC
GCCGTCGATG CGGTCATCAT GGAATTTGCC TGA
|
|---|
| Protein sequence | MFKKILIANR GEIACRIIKT ARRMGIATVA VYSEADADAL HAEMADEAVA IGPAPASQSY
LVAENIIAAC KQIGAEAVHP GYGFLSENAE FCERLESEGI VFIGPKSKAI RAMGDKITSK
KIAAEAGVST VPGHMGLVED AGHAARIAAE IGYPVMIKAS AGGGGKGMRI AWNDAEAREG
FERSRSEAAS SFGDNRIFIE KFVEEPRHIE IQVLGDGFGN CIHLGERECS IQRRNQKVVE
EAPSPFLDAK TRAEMGAQAI ALAKAVDYQS AGTVEFIVDS ERNFYFLEMN TRLQVEHPVT
ELVTGIDLVE QMIRIAAGER LEIAQDDVKL KGWAIESRLY AEDPTRNFLP SIGRLARYRP
PEEGRSGETV LRNDTGVTEG SEISMFYDPM IAKLCTWAPD RLGAIDAMSQ ALDRFVVDGI
AHNIPFLAAL MRHPRWREGR LSTAFIAEEY PDGFSIPAAG KAERAVFCAV ALAIELIRRD
RLDRLPGRLA PHSGVMRRDW VVKLDREYIP VSLVEGTGSI PTDLSISIDG AAPVTLSSSW
HPGERIWTGR VGRKEAAVQI RPVLNGHELS WQGVASVVKV MTPRIAELDR LMPERKAADM
SKKLLCPMPG LVVSIAVSEN QEVKAGEVLA IVEAMKMENV LRAERDCTVA AVLAAPGDSL
AVDAVIMEFA
|
|---|
| |