Gene Meso_0943 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_0943 
Symbol 
ID4180320 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand- 
Start bp1040815 
End bp1041477 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content61% 
IMG OID638066823 
Producturacil-DNA glycosylase superfamily protein 
Protein accessionYP_673505 
Protein GI110633297 
COG category[L] Replication, recombination and repair 
COG ID[COG1573] Uracil-DNA glycosylase 
TIGRFAM ID[TIGR00758] uracil-DNA glycosylase, family 4 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0789384 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCTTCC CCCTTGCGGC TGGAGATCCG CCGCGCGATT GCCCGCTGTG TCCACGTCTT 
CATAGTTTCA TCGCCGGCTG GCGCGAGAAG GAGCCGGAGT GGTTCAACGC GCCCGTTCAC 
ACTTTTCTTC CAACCGGCGG CGAGCAGGCT GTCAGGCTTC TGATCGTCGG CCTTGCGCCG 
GGTTTGCGTG GCGCAAACCG GACCGGGCGT CCCTTCACCG GTGATTATGC AGGCATGCTC 
CTCTATGGAA CGCTCATTCG CTTCGGATTC GCGAGCGGCC GGTTCGAGGC CCGGCCGGAC 
GACGGGCTGA GCCTCACGGA CGTAGCCATC ACCAATGCCG TCCGCTGCGT GCCGCCCGAA 
AACAAGCCGG AGACCAGCGA AATCCGCACC TGCCGGGATT ATTTCCTGAC ACCGACGATC 
AAACGCTTTC CGAACCTCAA GGGCATCGTG ACGCTCGGTA AAATCGCGCA TGATTCCACC 
GTGCGGGCGC TCGGCCATCG CGTGAGCGCC ATTCCCTTCA TCCACGGAGC CGAGGAACAG 
GCCGGAGATC TGCGCATTTT TTCCAGCTAT CACTGCTCGC GCTACAACAC GAACACCGGC 
GTCTTGACCG AAGAGATGTT CGTGGAGGTG TTTCGGAGAG CGAGGGAGTT TTTAAGCCAG 
TAA
 
Protein sequence
MSFPLAAGDP PRDCPLCPRL HSFIAGWREK EPEWFNAPVH TFLPTGGEQA VRLLIVGLAP 
GLRGANRTGR PFTGDYAGML LYGTLIRFGF ASGRFEARPD DGLSLTDVAI TNAVRCVPPE 
NKPETSEIRT CRDYFLTPTI KRFPNLKGIV TLGKIAHDST VRALGHRVSA IPFIHGAEEQ 
AGDLRIFSSY HCSRYNTNTG VLTEEMFVEV FRRAREFLSQ