Gene Meso_0899 details

Gene Information

• Locus tag: Meso_0899
• ID: 4182730
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chelativorans sp. BNC1
• Kingdom: Bacteria
• Replicon accession: NC_008254
• Strand: +
• Start bp: 988714
• End bp: 990702
• Gene Length: 1989 bp
• Protein Length: 662 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 638066778
• Product: cytochrome c-type biogenesis protein CcmF
• Protein accession: YP_673461
• Protein GI: 110633253
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG1138] Cytochrome c biogenesis factor
• TIGRFAM ID: [TIGR00353] c-type cytochrome biogenesis protein CcmF

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.160202
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGTCG AACTTGGCCA TTTCGCACTC GTGCTGGCGC TGGCGCTGGC CTTGGTGCAG 
GCGCTGGTGC CGCTCCTCGG CGCGCGCTTG GGCAGCGCTC CGCTGATGCG GATGGGCGAA 
CCGGTGGCCA TTACCGGGTT TGCGCTGATC GCGTTCGCCT TCGCGGCGCT GGTGCTTGCC 
TATGTCCAAT CGGATTTCTC GGTGCTGAAT GTGTGGGAGA ACTCACACTC GGCCAAGCCG 
CTTCTGTTCA AGATTACCGG GACTTGGGGC AATCATGAAG GCTCGATGCT CCTTTGGGTG 
CTGATCCTAG CCTTTTTCGG GGCTCTTGTG GCAGCCTTCG GCCAGAATCT GCCGCCAACG 
CTCAGGGCCA ATGTGCTGGC CATACAGGGC CTGATTGCCA GCGCCTTCCT CCTGTTCATC 
CTCTTTACCT CCAATCCCTT CATCCGCCTT GAGCGGGCGC CGATTGAAGG CCGTGACCTC 
AATCCGATCC TGCAGGACAT CGGGCTCGCG ATCCATCCGC CGCTGCTCTA TCTCGGCTAT 
GTGGGGTTCT CGATCTCCTT TTCGTTCGCG GTGGCGGCGC TGATCGACGG GCGCCTGGAC 
GCGGCTTGGG CACGGTGGGT GCGTCCGTGG ACGCTCGTTG CCTGGGCCTT CCTCACCGGC 
GGCATCGCGA TGGGCTCCTA CTGGGCCTAT TATGAATTGG GATGGGGCGG CTTCTGGTTC 
TGGGACCCGG TGGAGAACGC TTCCCTGATG CCCTGGCTGG CGGGTACGGC GTTGCTGCAC 
TCGGCCATTG TCATGGAAAA GCGCTCGGCA CTGAAAATCT GGACGGTGCT GCTGGCCATT 
CTCACTTTTT CGCTGTCGCT GCTTGGCACA TTTCTGGTCC GCTCGGGCGT TTTGACCTCT 
GTTCACTCCT TTGCGACAGA TCCCACACGC GGCGTCTTCA TTCTTGCGAT ACTGGTGTTC 
TTTATCGGCG GCGCTCTGGC TTTGTTTGCA GTAAGGGGCG CGTCGCTCGC GCCGGGTGGA 
CTGTTCCATC CCATTTCCAG GGAGGGGGCG CTTGTCTTCA ACAATCTGAT GCTTACGACC 
GCGGCGGCGA CGGTGCTCAT CGGCACTCTC TACCCCCTGC TGATCGAGGC CATCAGCGAA 
GACAAGATTT CCGTCGGCGC GCCGTTCTTT AATCTGACCT TCGTGCCGCT GTTCCTGCCG 
CTCCTGCTGG CCGTGCCTTT TGGGCCGCTT CTCGCCTGGA AGCGCGGCGA TCTGCCAGGA 
GCTCTCCAGC GCCTGCAATT CGCGTTCTGG GCAGCCGGGG CGGCCGCAAT CGCGAGCTAT 
TTCCTGATTG ACCGCGCCAA CGCCGCAGCT GCGCTCGGCA TCGGCCTGGG GCTGTGGCTT 
GTCTTCGGCG CGCTGACAGA TCTCGCTTTC AAATCCGGCA TCGGCAAGGT CGGGCCAGCA 
CTTGCCCTTC GCCGGCTCTC CGGCTTGCCC CTTTCGATGT TCGGCACCTG TTTCGCACAT 
GCCGGGCTGG GCCTTACCGT GCTCGGCATT GTCTCCGTCA CCGCGCTTCA GGCCGAGAAA 
ATCCTGACAA TGCAGCCAGG CCAGAGCACC GAAATCAGCG GCTACACTCT TCGCTTCGTG 
GATCTGCGGC CCTTCACCGG CCCAAATTAC ACGGAAGACC GCGCCGAGTT CGCGCTCGGG 
ACCACCCGCG GTGCGTCGCT GGGGGAACTC GTTTCGTCCA AGCGTCTTTA TACGGCCCGG 
GGTATGCCGA CGACCGAAGC CGGCATCAGA ACGATGGGCC TGAGCCAGCT CTATGTTTCG 
ATCGGTGACC GTACACCGGC TGGGCTCGTC GTGCGGATCT GGTGGAAGCC TTTCGTCACG 
CTGATCTGGG CCGGTGCGCT GGTGATGATG GGCGGCGGCT TCATCTCTCT CATGGACCGC 
AGGCTGCGCG TCGGTGCGCC GGCAAGGCGC AAAGCAGCGC TCGCGGCGGA CGGTGGGGGA 
ACGCGATGA 

 

Protein sequence

MSVELGHFAL VLALALALVQ ALVPLLGARL GSAPLMRMGE PVAITGFALI AFAFAALVLA 
YVQSDFSVLN VWENSHSAKP LLFKITGTWG NHEGSMLLWV LILAFFGALV AAFGQNLPPT 
LRANVLAIQG LIASAFLLFI LFTSNPFIRL ERAPIEGRDL NPILQDIGLA IHPPLLYLGY 
VGFSISFSFA VAALIDGRLD AAWARWVRPW TLVAWAFLTG GIAMGSYWAY YELGWGGFWF 
WDPVENASLM PWLAGTALLH SAIVMEKRSA LKIWTVLLAI LTFSLSLLGT FLVRSGVLTS 
VHSFATDPTR GVFILAILVF FIGGALALFA VRGASLAPGG LFHPISREGA LVFNNLMLTT 
AAATVLIGTL YPLLIEAISE DKISVGAPFF NLTFVPLFLP LLLAVPFGPL LAWKRGDLPG 
ALQRLQFAFW AAGAAAIASY FLIDRANAAA ALGIGLGLWL VFGALTDLAF KSGIGKVGPA 
LALRRLSGLP LSMFGTCFAH AGLGLTVLGI VSVTALQAEK ILTMQPGQST EISGYTLRFV 
DLRPFTGPNY TEDRAEFALG TTRGASLGEL VSSKRLYTAR GMPTTEAGIR TMGLSQLYVS 
IGDRTPAGLV VRIWWKPFVT LIWAGALVMM GGGFISLMDR RLRVGAPARR KAALAADGGG 
TR