Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_0546 |
Symbol | |
ID | 4180008 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | + |
Start bp | 606314 |
End bp | 608023 |
Gene Length | 1710 bp |
Protein Length | 569 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 638066428 |
Product | UvrD/REP helicase |
Protein accession | YP_673114 |
Protein GI | 110632906 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0210] Superfamily I DNA and RNA helicases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAACTGG AGCTGTGCGA CAAGCGAAAG GCGATCATCG CGCAGACCGG GCACCTGCTG GTGCTCGGTG GACCGGGCTC AGGCAAGACG ACGATCGCGC TTTTCAAGGC ACAAGGCCGC TTCGCGACGC TCAAGCCCGG TCAGGAAGTT CTGTTCCTGA GCTTCTCTCG CGCGGCGATC CGTCAGGTCC TCCTACGCTG CAAAGAAATC CTGACGCCGA GCCAGCGCCG GGCCGTCGTG GTCCAGACCT ACCACGCTTT CTGCATGGAG ATGCTGGAAG CACATGGGCG GCTGTTGCAT GGGCGGTCGG TGCGTTTTCT TTACCCTGGC GAGGAACGGC TTCAGAAGTC CGCGTTCGAC GGGGACTGGA GTGTCGAGCG CAAGCGTCAG GCAGCAGAAA TGGGGCTTTA TTGCTTTGAC CTATTTGCGG CGGGCACGGC CGATCTGCTC GAAGGCTGCG CGGCGCTACG CGGGCTAGTC GCTGATCGGT TCCCAATGAT TATCGTCGAT GAGTTCCAGG ACACCGACGA TAATCAGTGG CGGATCGTGC GGGCGCTCGC CCAAGTGACC GACGTATTCT GTCTGGCGGA TCCGGAGCAG CGGATCTTCG ATTATCGGGA CGACATCGAT CCTCGCCGGC TGGACATTCT GCGCGAGGCT GTCGCGATCG CCGAATTCGA TCTCGGTGGC GAAAACCACA GGAGTCCGAA CGCCGGCATC CTCCATTTTG CCGATGCGGT GTTGCGTAAT CAAGGTCCGC TGCCGGTGAC ACCTGACGTC AAACAGGTGA GCTATTGGGG GAACGCTTTC TCCGCGACGG TTCATGCGGC GGTAATCTGG ACTTTCAGTG CGTTGCGAAG AAAAGGTGTC GAGAAGCCGA GTGTCGCGGT GCTGTCGCGG AGCAACTCGC TGATCTCTGA CCTTTCGGTT ATCCTTTCCG AGCCTCACAC CTACAACAAC CAGCTGCTCT CCGTCATTGA GCATGATGTC GTGTGGGATG CGGAGCTATC GGCTGCGGCG GCAATCGTGG TCGCATCGAT CCTGGAGTGG CCGACGGGGC TGGCCGCGGA GAGCTTGGCG CGGACGCTTC TGGCGATCGC CGGCTTCTAC AAGCTGAAGA ACGCGGAAGA GCAAACCAAC ACGGCAGCCG AGAACGCTCG CAAATATGAC GAGGCTGCGG CCAAGGTGGC GAAGGGTGAG GAACCGCGGA TCAAAGCCGC GAAGGCATTG GTCGCCGCTC ATGCAGCCGG TGTCGCGTTG ATCGGCGAGC CGGTGGCGGA CTGGAAGGTG GCGCGTCGCC TGCTTCAGGA CATCCCTGCG CTCAGCGAAT TATTCCGCGA AGTGCGGCTT GTCCGCCTCT TCAGGGCGAC GGATGCCCTG GCATCGGGCC TTAGTGAACG CTGGCTTGCA TCAGGCAGTT ACCGGGGTGC GAGTGACCTC GTGAAGCGCA TCCTTGAACA GGAGCGGCTC ATCGCTGCCG AGCGCGATTC ACAGTTCGGC TGCATTCTGA TGAATATGCA CAAGGCCAAA GGCAAAGAGT TCGATGGCGT GGTGCTTGTT GAAGGTGCCT TCAAGTCGGG GTTCTTTGAC GAAAGGACTG AGCAACCCCC ATTTGAGCGC AGCCGCCGGT TATTGCGAGT GGGTTTGACG CGGGCGCGGA CACTGGTGAC GATTGTTCGA CCTCAAAATG CGAGGCCTTT GGTCGACTAG
|
Protein sequence | MKLELCDKRK AIIAQTGHLL VLGGPGSGKT TIALFKAQGR FATLKPGQEV LFLSFSRAAI RQVLLRCKEI LTPSQRRAVV VQTYHAFCME MLEAHGRLLH GRSVRFLYPG EERLQKSAFD GDWSVERKRQ AAEMGLYCFD LFAAGTADLL EGCAALRGLV ADRFPMIIVD EFQDTDDNQW RIVRALAQVT DVFCLADPEQ RIFDYRDDID PRRLDILREA VAIAEFDLGG ENHRSPNAGI LHFADAVLRN QGPLPVTPDV KQVSYWGNAF SATVHAAVIW TFSALRRKGV EKPSVAVLSR SNSLISDLSV ILSEPHTYNN QLLSVIEHDV VWDAELSAAA AIVVASILEW PTGLAAESLA RTLLAIAGFY KLKNAEEQTN TAAENARKYD EAAAKVAKGE EPRIKAAKAL VAAHAAGVAL IGEPVADWKV ARRLLQDIPA LSELFREVRL VRLFRATDAL ASGLSERWLA SGSYRGASDL VKRILEQERL IAAERDSQFG CILMNMHKAK GKEFDGVVLV EGAFKSGFFD ERTEQPPFER SRRLLRVGLT RARTLVTIVR PQNARPLVD
|
| |