Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_0408 |
Symbol | |
ID | 4182240 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | - |
Start bp | 453511 |
End bp | 454266 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 638066290 |
Product | IclR family transcriptional regulator |
Protein accession | YP_672977 |
Protein GI | 110632769 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.317858 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGATGTGA CCACAGATGC AGGTCCGGCC GAGTTCCAGG CTGCTCCCGT GCGCTCCCTG TCCAAGGGAC TGGCCGCGCT CGACATTCTT CGTGGGGAGG GGGAGTTGCG CACCACCGAT CTGGCGGCGC GCCTTTCCAT CGACAAGGGC GTAGCGTCCC GCATCCTGCA GACGCTTGCG CAGACAGGTT ACGCCGAGCG CATGCCGGGG CGCCGTTACC GCATCGGCCC AAAGCTTGCG GCGCAGGAGC ACGCCGTTCT GTCCGTCGGT ATCAGGGCGA GCGCTCGCCC GCTGCTCGCG CGCCTCTCCG AACAGGTCCA GGAAGCAGTC TATCTGGGAG TCCTCGTCGA CGGGCAAGTG CTTTATCTGG ACAAGGAAGT GCCTGCGAGC GAACTGAAGG TGGACCGGCC CATTCCCACG CTGGCTCCCT TGTACTGTAC GGCCATCGGC AAGCTGTTTG TCGCGATGCA TGGAATATCC GTGCCGAGGG AACTGCCTGC CTATACGCCG AGGACGATTG CCGACCCGGC GCTCTATGCC ACTGAGATCG CAGCTATAGC GGAGAGAGGC TATGCCTGGG ACGATGAGGA GTTCCATCTT GGCGTGCGTT GTGTCGCTGC GCCTCTCCGC GACCGCGGGG GCAAGGTGCT GGGCGCCTTG AGCGTAGCCG CCCCGAGCGT TCGGCTTGCA AGCGAAGATA TCGAAGCGGC GGCGAGAATC ACCAAGAATG TCGCCGACGC CTTCACGGCG CCGTAG
|
Protein sequence | MDVTTDAGPA EFQAAPVRSL SKGLAALDIL RGEGELRTTD LAARLSIDKG VASRILQTLA QTGYAERMPG RRYRIGPKLA AQEHAVLSVG IRASARPLLA RLSEQVQEAV YLGVLVDGQV LYLDKEVPAS ELKVDRPIPT LAPLYCTAIG KLFVAMHGIS VPRELPAYTP RTIADPALYA TEIAAIAERG YAWDDEEFHL GVRCVAAPLR DRGGKVLGAL SVAAPSVRLA SEDIEAAARI TKNVADAFTA P
|
| |