| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_0224 |
|---|
| Symbol | |
|---|
| ID | 4180759 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | + |
|---|
| Start bp | 253748 |
|---|
| End bp | 255214 |
|---|
| Gene Length | 1467 bp |
|---|
| Protein Length | 488 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 638066104 |
|---|
| Product | phage uncharacterized protein |
|---|
| Protein accession | YP_672793 |
|---|
| Protein GI | 110632585 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5410] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR01630] phage uncharacterized protein (putative large terminase), C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTCGAAGC CGCTCTACGC GCCGACACTT GAAGACCTCG CCTTTTCCCG GCTCATTGCA
TATGCGGCAT ATCAATGGCC TGGCTATCGG GACGCGGCGC ACCATAGGCT TATCGCGCGC
CATCTGGAGG CTGTAGAGCG GGGCGAGATC AAGCGCCTTA TGATCACGAT GCCGCCGCGC
CATGGCAAAT CCATGCTGGC GTCGGAGTTC TTCCCGGCTT GGTATCTTGG TCGCAACCCT
GATCATTACG TTGTCACGGC CACCTATGCA CAGGAACTGG CCGACGATTT CGGGCGCAAG
GTCAAGAACC AGATCGAGGA CGATTATTTT CGGGCTGTGT TTCCCGGCGT CGGGCTGGCT
GACGATAGCA AAAGCGCCAA GCGGTTTCAC ATAGATGGGC AGTTCGGCGG CTACGAGCAC
GGCACTACGC AACGCGGTGC GTTCTACGCT GTCGGCGTGG GTGGACCACT CACCGGTCGT
GGGGCTCATC TGCTGCTCAT TGATGATCCG GTTAAAAACC GGGAAGACGC GGAATCCGAG
GTAATCCGCA AGAAGACCAA GGACTGGTAC ACGTCGACCG CCTACACGCG CCTAATGCCG
GGTGGCCGCA TCGTCATCAT CCAGACGCGG TGGCACGAGG ACGATCTGGC TGGCTGGCTC
CTTTCGGAGC ATGGTCACGA AAACTGGACA GTTCTAGATC TTCCGGCCAT CAGCGATGAT
GGAGAGGCCC TATGGCCCGA ACAATACGAC ATCGAGGCAT TGGAGCGCAT AAAGCGCGCC
CTTCCGCCGC GTGACTGGTC GGCGCTCTAT CAGCAGCGGC CAAGCCCCGA GACGGGCGAC
TATTTCAAGC GCGAATGGGT TCACACCGTC GATAAGCTGC CGCCACGCGA TCAGATGCTG
ATCTATGGCG GTTCTGACTA TGCCGTCACA GCAGATGGCG GCGACTTCAC CGTGCACGTG
GTGATTGGGC TCGATCCAGA AGGCCGCATG TATTTGCTCG ACCTGTGGCG CGGGCAAGCC
TCGTCGGATG TATGGGTAGA GGCGTTCTGC GATCTGGTCC TGAAATGGAA GCCCGTTGGC
TGGGCGGAAG AGACAGGCCA GATCAAAAGC GGCGTTGGGC CATTCCTCGT TAAACGTATG
CTGGAGCGAG CTGCATATGT CGCTCGCGAG AGTTTCGCCA CGCGGGGCGA CAAGGCAATC
AGGGCGCAAT CAATTCGTGG CCGCATGGCG ATGAACGGGT TGTACGTCCA CAAGGACGCG
CCGTTTCTGT CCGACCTGAT TTCGGAGCTT ATGAGTTTTC CGGTTGGCGT CCATGACGAT
CAGGCCGACG CGCTCGGGCT CGTGGGGCAA TTGATCGATC GCATGAGTAA CGGCAGCAAG
CCCAAGGCAG AGAAGCCCAA GCCTGTCTAT GCATTCGATG ACGGTAAGGT GCTTGCGCCA
CCGCTACCGG GGCAGAGGAG ACGATAA
|
|---|
| Protein sequence | MSKPLYAPTL EDLAFSRLIA YAAYQWPGYR DAAHHRLIAR HLEAVERGEI KRLMITMPPR
HGKSMLASEF FPAWYLGRNP DHYVVTATYA QELADDFGRK VKNQIEDDYF RAVFPGVGLA
DDSKSAKRFH IDGQFGGYEH GTTQRGAFYA VGVGGPLTGR GAHLLLIDDP VKNREDAESE
VIRKKTKDWY TSTAYTRLMP GGRIVIIQTR WHEDDLAGWL LSEHGHENWT VLDLPAISDD
GEALWPEQYD IEALERIKRA LPPRDWSALY QQRPSPETGD YFKREWVHTV DKLPPRDQML
IYGGSDYAVT ADGGDFTVHV VIGLDPEGRM YLLDLWRGQA SSDVWVEAFC DLVLKWKPVG
WAEETGQIKS GVGPFLVKRM LERAAYVARE SFATRGDKAI RAQSIRGRMA MNGLYVHKDA
PFLSDLISEL MSFPVGVHDD QADALGLVGQ LIDRMSNGSK PKAEKPKPVY AFDDGKVLAP
PLPGQRRR
|
|---|
| |