| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mesil_2844 |
|---|
| Symbol | |
|---|
| ID | 9252366 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Meiothermus silvanus DSM 9946 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014212 |
|---|
| Strand | - |
|---|
| Start bp | 2900025 |
|---|
| End bp | 2902517 |
|---|
| Gene Length | 2493 bp |
|---|
| Protein Length | 830 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | ATP-dependent helicase HrpB |
|---|
| Protein accession | YP_003686194 |
|---|
| Protein GI | 297567222 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.454612 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGCCG AGCCCCTCCC CATCCACGAA GCCCTGCCCG ACCTCAAAAA GGCATTGGCT
CACCACCCCA CGGTGATCCT GCAAGCCCCG CCGGGAGCCG GGAAAAGCAC GGTGTTGCCG
CTCGAGCTTC TGAATGAACC CTGGCTGGTC GGGCGAAAGA TTCTGATGCT CGAGCCCCGC
CGCCTGGCGG CCCGTGCGGT AGCGGCCCGG ATGGCGGCCC TCTTAGGCGA GGAGGTGGGG
CAGACAGTGG GCTACCGGGT GCGCTTTGAG AACCGCGTGG GCCGACAAAC CCGGCTCGAG
GTGCTTACCG AGGGCATTCT GACCCGCCGC CTCCAGCATG ACCCCAGCCT GGAAGGGGTG
GGGGTGGTGA TCTTCGACGA GTTTCACGAG CGCAGTCTGC AGGCCGATCT GGGCCTGGCC
CTCACCCGCG AGGTGCAAGG GGCTCTGCGC GAGGATTTGC GCCTGCTGGT GATGTCGGCT
ACCCTCGACG GGGAGTCCTT GAGCCGGGCG CTAGGCGATG TCCCTTTGGT GACCGCTCAG
GGCCGCCAGT ACCCGGTGGA ACTCCACTAC CTCGCGCGCG ACCCCCAGGG GCACCTGACC
GCCACGGCAG CGGGGGCTGT TGCGCGGGCC CTCGAGCGCC ACGAAGGGGA TGTGCTGGTG
TTTCTGCCCG GGGTGGGGGA GATCCTCCGC AGCGAGAAGC TTTTGAAGGA GCGCCACCCC
GAGCTTCGGG TGCTGACCCT GTATGGCGAT TTGCCCCTCT CGGCTCAGCA AGAGGCCATC
CTGCCCGACC CCGTCGGGCG GCGCAAGGTG GTGCTGGCGA CCTCGGTGGC TGAGACCAGC
CTGACCATCG AGGGGGTGCG GGTGGTGGTG GATTCGGGCT TTTCCCGGCT TCCCCGCTTC
GACGCCCACA GCGGGCTGAC CCGCCTCGAG ACCGTGCGGG TCACCCGCGA CTCCGCCGAT
CAGCGGGCCG GGCGGGCAGG CCGGTTAGGG CCGGGGGTCT GCTACCGGCT ATGGAGCCCG
GCCACCCAGG CCACGCTTCT TCCCCAGCGC CGCCCCGAGA TCCTGGAGGC CGACCTGGCC
TCGCTGGTGC TCGAGCTGGC CCAGTGGGGG GTGCGCGACG TGTACGCCCT GAACTGGGTC
ACGCCCCCGC CCGCGGGGGC GGTGCGGCAG GCCCGCGCCT TGCTCGAGGA ACTGGGGGCA
TTCCAAGGAG GCACCCTCAC CGAGCGCGGG CGGCAGATGC TCGAATGGCC CACCCACCCC
CGCCTGGCCC ACCTCCTCAT CGAGAGCCAA AGGCTAGGGC TTGAGGCTTT GGCCGCAGAC
GTGGCGGCCT TGCTCGAGGA GCGCGACCCG CTCCCGCGGG AGAGCGGGGC CGATCTGACC
CTGCGGGTGG TGGCCCTGAG AAACTGGCGC GCTCGGCGCG GAGACTTGCA GGGGGCCGAT
CCGGGGGCAT TGGCCCGTAT CGAGCGCCTT TCGCAGCAGT GGCGGGGGCG CCTGGGTGTG
CACGCTCTCG ATGAGGTACC CGATCCCTAC GCCATCGGCT TGCTCTTGGC CCTAGCTTAC
CCGGATCGGG TAGCCCGGAT GCGCGCGGGA GAGCCTCAGC GCTACCGGCT CTCCGGCGGG
CGCGGGGTAC GCCTGGCCGA TGACGACCCG CTTCAGGGCC AACCCTGGCT GGCCGCAGCC
CACCTGGACG CGGGAAGCGA GGAGGGGCGG GTCTTTCTCG CCGCCCCGGT GAGGCCGGAA
GACCTCGAGC CCTATGCGCG ATCGGTCGAG GTGGTGGGTT GGGATGCTCG AGCCGGGGTG
TTGCTGGCCC AGCGCGAGCG CCGCATCGGG GAGGTGGCGC TTTGGGTGGA GCCGCTCGAG
CGAATCCCTA GCGAGGAGCG CCTGCGGGTA CTGTGCCAAG TAGTGCGCTC TGAGGGGTTG
GACGTTCTGC CCTGGACGGA GAACCTGCGG CAGTGGCAGG CTCGAGTGCT TTCCTTGAGG
GCCTGGCGGC CCGAAGAAGC TTGGCCGGAT ATCTCGGATG GGTATTTGCT CGAGACCTTA
GAAGACTGGC TCGGTCCCTG GCTGGGTGCA GTCTCGAAGC AGGAGGACTT CTCCCGGCTG
GACTTGGTGG GGATTCTGGC GGGCTTCCTG CCCTGGCCCC TTTCGACCCG CCTCGACGAA
CTGGCCCCCA CCCGCCTCAC CGTGCCCAGC GGCTCCTCGA TCAAGCTCCG CTACAGCCCC
GACGGGAGCC CCCCGGTGCT GGCCGTGCGC ATCCAAGAGA TCTTCGGGTT GGCCGATACT
CCCCGGGTCA ATGAGGGGCG CACCCCGGTT CTCTTGCACC TCCTCTCCCC AGGCTACCGC
CCGGTGCAAG TGACGCAGGA CTTGAAGAGC TTCTGGGCCA ACACCTACCC CGAAATACGT
AAAGAGCTGC GGGGCCGCTA CAACAAGCAC CCCTGGCCGG AAGACCCCTG GAATGCTCAG
CCTACCCGTA AAGCCAAGCC GAGATCACAA TGA
|
|---|
| Protein sequence | MLAEPLPIHE ALPDLKKALA HHPTVILQAP PGAGKSTVLP LELLNEPWLV GRKILMLEPR
RLAARAVAAR MAALLGEEVG QTVGYRVRFE NRVGRQTRLE VLTEGILTRR LQHDPSLEGV
GVVIFDEFHE RSLQADLGLA LTREVQGALR EDLRLLVMSA TLDGESLSRA LGDVPLVTAQ
GRQYPVELHY LARDPQGHLT ATAAGAVARA LERHEGDVLV FLPGVGEILR SEKLLKERHP
ELRVLTLYGD LPLSAQQEAI LPDPVGRRKV VLATSVAETS LTIEGVRVVV DSGFSRLPRF
DAHSGLTRLE TVRVTRDSAD QRAGRAGRLG PGVCYRLWSP ATQATLLPQR RPEILEADLA
SLVLELAQWG VRDVYALNWV TPPPAGAVRQ ARALLEELGA FQGGTLTERG RQMLEWPTHP
RLAHLLIESQ RLGLEALAAD VAALLEERDP LPRESGADLT LRVVALRNWR ARRGDLQGAD
PGALARIERL SQQWRGRLGV HALDEVPDPY AIGLLLALAY PDRVARMRAG EPQRYRLSGG
RGVRLADDDP LQGQPWLAAA HLDAGSEEGR VFLAAPVRPE DLEPYARSVE VVGWDARAGV
LLAQRERRIG EVALWVEPLE RIPSEERLRV LCQVVRSEGL DVLPWTENLR QWQARVLSLR
AWRPEEAWPD ISDGYLLETL EDWLGPWLGA VSKQEDFSRL DLVGILAGFL PWPLSTRLDE
LAPTRLTVPS GSSIKLRYSP DGSPPVLAVR IQEIFGLADT PRVNEGRTPV LLHLLSPGYR
PVQVTQDLKS FWANTYPEIR KELRGRYNKH PWPEDPWNAQ PTRKAKPRSQ
|
|---|
| |