| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mesil_2805 |
|---|
| Symbol | |
|---|
| ID | 9252327 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Meiothermus silvanus DSM 9946 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014212 |
|---|
| Strand | + |
|---|
| Start bp | 2857657 |
|---|
| End bp | 2858751 |
|---|
| Gene Length | 1095 bp |
|---|
| Protein Length | 364 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | |
|---|
| Product | polar amino acid ABC transporter, inner membrane subunit |
|---|
| Protein accession | YP_003686157 |
|---|
| Protein GI | 297567185 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.24479 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACACAA TCAACAAGCA GGGGCGCAGC AGCGCCCCTT CGATTCCTAA AGACGCCACC
CCCTTGGCCC TGGCTGCCTT GGTGGTGAGC GCTTTGGTCA TTGCCGGAGC CTGGGCTACT
TTGGAGAAGC TGCACAAAGT GCTCGTGCAA AACAAACTCG AGCACCCCTG GGTAATCGCC
TTGCTGGCCT TAGCCGCCTT GCTCCTCTTG CTGCTGCTTT TCCCCGCAGT GCGGGGGTTG
CGCGACGCCG GCCAGGCTCG AGCCGCCCTC GGGCGCCACG AGCTGATCGA AGCCCGGGTC
AAGGCCGCGG CGGCCCGCGA ATGGGCCTGG TACGCCATTG GCTATGCGGT AGCGGCCGCG
CTGGTTTTCA TAACCATCCA GTTCTTGCTA GCCAACGACG GAGCGGTAGG GGCTACCTTC
TTCAAGCTCT CGCTGATCCA GGATTCGTTC GGCCTGGTTC TGCAGGCTTT TTGGAAAAAC
GTCTGGATGT TCTGCGTGGC CGAGGTCTTC ATCTTGGTCT GGGGGTTGGT AATCGCGGTA
GCCCGCATGG TCCCAGGGCG GGCCGGATCC CCGATCCGCT TTTTGGCCAC CGTCTACACC
GACGCATTCC GGGGACTGCC CACCATCATC AGCATCTACC TCATCGCCCT GGGTCTGCCG
CTGGCTAATG TGCCCTTGGT GCGCGACTGG CCCCCGGAGT GGCTGGCCGT TCTGGCCCTC
ACGGTGAGCT ATGGGGCCTA CGTGGCCGAG GTTTACCGCG CCGGACTGGA TAGCATCCAT
CCCAGCCAGT GGGCCGCGGC CCGCTCGCTG GGCCTTTCCT TTAGCCAGAC CCTGCGCTTT
GTGATCATTC CCCAGGCGGT GCGGCGCATC ATACCGCCCC TCTTGAACGA CTTTATCGCT
TTGCAAAAAG ATACCGCGCT GGTGAATGTG GTGGGGGTGA TCGATGGTTT CAACCAGGCC
AAGATCATTG CCAGTAACCG CTTCAACCTC TCGGCGGTGA CTACGGTGGC GATTTTGTTC
ATGCTGATTA CCATTCCCCA AACACGCTTT GTAGACCGGC TTCTCGAGCA GGAGAAACGG
CGCACCCGGG CTTAG
|
|---|
| Protein sequence | MNTINKQGRS SAPSIPKDAT PLALAALVVS ALVIAGAWAT LEKLHKVLVQ NKLEHPWVIA
LLALAALLLL LLLFPAVRGL RDAGQARAAL GRHELIEARV KAAAAREWAW YAIGYAVAAA
LVFITIQFLL ANDGAVGATF FKLSLIQDSF GLVLQAFWKN VWMFCVAEVF ILVWGLVIAV
ARMVPGRAGS PIRFLATVYT DAFRGLPTII SIYLIALGLP LANVPLVRDW PPEWLAVLAL
TVSYGAYVAE VYRAGLDSIH PSQWAAARSL GLSFSQTLRF VIIPQAVRRI IPPLLNDFIA
LQKDTALVNV VGVIDGFNQA KIIASNRFNL SAVTTVAILF MLITIPQTRF VDRLLEQEKR
RTRA
|
|---|
| |