Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mesil_2325 |
Symbol | |
ID | 9251841 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Meiothermus silvanus DSM 9946 |
Kingdom | Bacteria |
Replicon accession | NC_014212 |
Strand | - |
Start bp | 2356230 |
End bp | 2358992 |
Gene Length | 2763 bp |
Protein Length | 920 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | TPR repeat-containing protein |
Protein accession | YP_003685692 |
Protein GI | 297566720 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.86445 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCTACC GTGTGCCCAA GAGCCGTCTG CTTCCCCCGC GCACCGCCCG TGAAGTACGC CGGGAGCGGC TCTTGCATAC CCTCCGCCAG GGCTTCCCCA AAAGCCCGGT GCTGGTGCTG GCAGCGGGGG CGGGTTACGG GAAGTCTACC CTTATGGCTT CCTACGGCGG GCTATGGCTT TCCCTCGGGG AAGAGGCCAA AGACCCAGTG GTGCTGGGCT GGCATTTGCT TGAGGCTTAC CGCCCCCAGT TGGAAAACCC GGGCGAAATT GAACAGGCCC TCGAGCGCGG CGCCTGGACG TTAGCGGGAG AGGCATTGTT AGAGGAGGTG AGCGCGCTCG AGCCCCACAC CCTGGTCTTG GACGAGGCGC AGCGGGCCGC GAGCCGCGAG GCGGTGGCGT TCGTACGTAC CCTGGCCCAA TCCCCCAACC TGAGCGTGGC TATCCTTTCC CGCCGGGCAG CCCCCTGGGA GGTGCTGGGG CGGGTCATCG GTGAAGCGGA GCTGGCCTTT GACCCCAACG AGGCGCTCTT GCTGGCTCGA GCCCTGACCC CCGAACTCCC GGCTTTCGAG GTGGAGCGGG CTCATAGCCT GGTGCGGGGC TGGCCGCTGG GGCTACGTCT GTTATTGCGG GCTATGCGGC GGGGCATCCA GCCGGAGGAA GCTTTCTATG CCCATCCCGA CGCAGCTGGC CTGCTGGCTT ATTTGTTGCC GGGGCTGCCC GAGGAGGTGC AGAAACGGGC GGCTCGGGCG AGCGTGCTGG GGGAGTTTGG GCCGGAGGAG GCAGAACTCT TGGGTATCCC CGACGTCGAT CTCGAGTTCT ACGCCGAAGA CCTCCTGCTC GAGCGCGTGG GCTCTCGGCT GCGCTTCCAC CCCCTGGTAC GCCGGGCCTT GATGGGCACG CTCGAGCCCG CCGAGACCCG GAGTCTGCTC AGCAAGGCCG CGGATGCAGC GATGGCGCGC GGGGAAGGGG TAAGGGCGGC GGGGTATTTG CTGGAGGCCG GGCGGTTAGG CCACGCGGCG GATCTGCTGT TGCAACAAGG CGAAAGCTGG CTGGCCTCGG GGCTTATGCA CACCGTTTTG GGTTTGTTGG ACCGGATGCC TGATGCGCTG GTGCGAGCCC GGCCTGAACT CATCTACTTG CGCGCCGAAG CCTTGCGCCA TGCCGGGCGC TACGCCCAAG CCGAGGCGGC CTACCAGGAG GCGCGGGCAG CGGGGGTGGA GCGGGCCTGG TTGGGGTTGT CGCGCCTTTA CCTCGATACG GTAGAACCCG CTAAGGCGTG GCCCTATCTG GACGCAGCCC AAGCCCAATT TCCCGAGGCA GCGCGGGCAT TGCGGGCGGA GAACCTGCTC AATGCGGGCC GGGTGGAGGA GGCCGTGGCA CTCGGACTGA CCGGACCCAG AGTGCTGCTG CGTAGCGGAC AGCCCGTCCA GGCGCTCGAG TTGCTGCGGG AGACGCTTAG CTCACCGCGC AGCGGGGTAG GAATCACCCC GGTCTTCCCG GCTGATCGCC CGCCCAAGAA TCACCGCGAA GACACGCTGC TGCTCTCGCT GCTCGAAGCC GTCGCCGGGA ATGCCCAAGC CGCTATGGCC GCTGCTTTGC GCGGGAGAAA GCAGGGCGAG GCCATGGGCA GCCCTTTCGT GGTGGCGCTG GCGGAGGCTC GGCTGGGCCA CGCCCTGTTG GCGCAAAACC GCTGGGAGGA GGCTCGAGCT GCCTACGAGC GGGCGCTCTC GCTAGCTGAG GGCGGTCCCG GGCGGCTCAA GGTGGAGGCG CTCGGGGGGG TGGCGGCTAC CGGCGAAGAC GCCGCGTACA CGGAAATGGT GCAGTTAGCG CGGGAATCCG GTGACGCCTG GGTGGAAGCC TTCATCACCC TCACCGTAGC CTATGCCCGG CTGCGCCAGG GGAAGACCTT TGCCTTGCCG GCCCTAGCCG TACAGGATCC GTTTTTGCTC GAGCTAGCCG CGGTATACCC TTGGGACCAA GGGGGTGCGG CGACCCTGAA GCGCTACCCT TTCCTGGGCG AGGCCACGCT GTTTGCTCCT CCCATTGAGC GGGTGCGTCG CCTGCTATGG GAGATGGGGC AGCTCGAGGT AGCCTACCAT CCCGGAGTGC GGGTGGAGAT ACGGGCCTTG GGAGGGCTAT CGGTCGCGGT GAACGGCCAG GCGGTGCGCT TCAGGCGGGA GAAAACCCAG CTTCTGCTGG CTTTGTTGTT GCTACGGGAT TGGAGCAAGG AGGAGTTGAT GGAGGCGCTG GAGGTATCGG ACGGCGAATT TCGGGTGCTG TGGTCGGAGC TATTGCACCT CTTAGAGCCG GGTCGCCCCC CGCGCGCTCG GGGGTATTTT TGCAAGCCGT ATGGCCTGGT GCGCGTGCCC GAACTGAAGG TAGACCTATG GGAGTTCGAT GGCTTGGGAT CCCGCACCGC CGAGGGTCTA GCGACCCTTC ACTGCGCTTT TGCCCCCCCT TTTGCGGGGC TCGAGCATCC TCTATTGGAA GCCGCTGGGA CGGAGATCAC TGCGCGCTAC CGCGAAGGAA TACTCCGCCG CGGCGACGAG GAAGCCCTGC TGGAAGCCCT CCGCCTGGAT CCATTGGACG AGCCGCTGGT CGAGCGTCTG CTACGTACCG CGCGGGCCGA GGTAGCCTGG GCTATCCATA CCCAGGCCTT GCGCGAACTG GGTCTCGAGC CCAACGCGTT GCTTTTAGCG CAGGCCGAGG CGCGCAGAAC TAAGCTGAAA CCGAACCCCC CGGCTGCTGG AACTGCTGGA TAA
|
Protein sequence | MPYRVPKSRL LPPRTAREVR RERLLHTLRQ GFPKSPVLVL AAGAGYGKST LMASYGGLWL SLGEEAKDPV VLGWHLLEAY RPQLENPGEI EQALERGAWT LAGEALLEEV SALEPHTLVL DEAQRAASRE AVAFVRTLAQ SPNLSVAILS RRAAPWEVLG RVIGEAELAF DPNEALLLAR ALTPELPAFE VERAHSLVRG WPLGLRLLLR AMRRGIQPEE AFYAHPDAAG LLAYLLPGLP EEVQKRAARA SVLGEFGPEE AELLGIPDVD LEFYAEDLLL ERVGSRLRFH PLVRRALMGT LEPAETRSLL SKAADAAMAR GEGVRAAGYL LEAGRLGHAA DLLLQQGESW LASGLMHTVL GLLDRMPDAL VRARPELIYL RAEALRHAGR YAQAEAAYQE ARAAGVERAW LGLSRLYLDT VEPAKAWPYL DAAQAQFPEA ARALRAENLL NAGRVEEAVA LGLTGPRVLL RSGQPVQALE LLRETLSSPR SGVGITPVFP ADRPPKNHRE DTLLLSLLEA VAGNAQAAMA AALRGRKQGE AMGSPFVVAL AEARLGHALL AQNRWEEARA AYERALSLAE GGPGRLKVEA LGGVAATGED AAYTEMVQLA RESGDAWVEA FITLTVAYAR LRQGKTFALP ALAVQDPFLL ELAAVYPWDQ GGAATLKRYP FLGEATLFAP PIERVRRLLW EMGQLEVAYH PGVRVEIRAL GGLSVAVNGQ AVRFRREKTQ LLLALLLLRD WSKEELMEAL EVSDGEFRVL WSELLHLLEP GRPPRARGYF CKPYGLVRVP ELKVDLWEFD GLGSRTAEGL ATLHCAFAPP FAGLEHPLLE AAGTEITARY REGILRRGDE EALLEALRLD PLDEPLVERL LRTARAEVAW AIHTQALREL GLEPNALLLA QAEARRTKLK PNPPAAGTAG
|
| |