| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mesil_2246 |
|---|
| Symbol | |
|---|
| ID | 9251762 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Meiothermus silvanus DSM 9946 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014212 |
|---|
| Strand | + |
|---|
| Start bp | 2263451 |
|---|
| End bp | 2264692 |
|---|
| Gene Length | 1242 bp |
|---|
| Protein Length | 413 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | efflux transporter, RND family, MFP subunit |
|---|
| Protein accession | YP_003685622 |
|---|
| Protein GI | 297566650 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.489161 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.829342 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAACG CCAAACCCAC GACGCTAAGC GCCCGGCATG GGTTGGTGCT GCTGGCGGTG
GCTGGCCTGC TCCTATCGGG CTGTAACAAC CGCCGGGGAA ACGTGGAAGC GACTACAGCC
ACCCCCACCC AAGCCGCGCC TCGGGTTACC AAAGTCCGGG CGGTAACCCT CAAGGAAGGG
GTCTTGACCG TGAGCCGTAC TGCCGGGGCT ACGTTGGCCC CGCTACGGGA AAGCAATGTG
GCCTCGAGCG CCAGCGGCAA GGTGCTGGCG GTGCTGGTCG AGGAGGGCAG CCGGGTCGGG
GCGGGCCAAA CGGTGCTGCG GCTCGATGAC GCAACCGCCC GCACCGCGGT ACAAAACGCC
GAACTGGCGC TGGAGCAAGC CAGGATCAAC CTCGAGCGCA CCTCGCGCTC CACCGAAGGC
AGCCTGGCTC CCCTTCAGGC CGCCCTCCAG GCGGCACAAG CCAATCTGCA GGTGGCCCAA
CGGCGCTATA CCGAGGGCCA GCAGCTTTTC CGGGTGGGGG CTATAGCCCA GGTGGAACTC
ACCAGCCTGG AGGCCGCGCT GGGCCAGGCC AAGTCCAACG CCGAAAACGC CCGCGAGGCG
CTCGAGCGGG CTCAGCGGGC CAACCGTGAA GATCTGGCGT TGCTGCGGGT GCAGGTCCAA
CAGGCCGAAG CCCAACTGGC CCAGGCCCGG CGCGCCCTAG CCGACACCGA GGTCAAGGCT
CCTTTTGCTG GGGTGGTAGC AGAAGTGTAC GTCAACCCTG GGGAGTTCGT AGCAGCGGGC
TCGCGGGCTT TCCGACTGGC CGATGTCCGC CGGCTCGAGG CCAAATTTCG CATCCCTCCC
TCGGAAGCGG CCAAGCTCGC CCCGGGAACC GGGCTGAACC TCGACTACGG CGGCCAAACT
TACTTCGCCC GCCTCAGCCG CACCAGCCAG ATCCCCGGTA CTGACCGGCT AGTAGAAGCG
GTGGCCACCC TTCAGGCCCC CCTTCCGCCC GGAGCCAGCG CCAGCGTGCG TTATACCCTC
GAGATAGCTA AGGGGGTAAT CGCGCCTAGC GGAGCTTTGC TACCGGGCGA ACAACCTAGG
GTCATGCTCG TGGAAAACGG TAAGGCCAAA GCTGTAAAGG TGGAGATCTT GGGCGATAAC
GGCAGCCAGC TAGCTCTACG GGGCGTCAGC GCGGGAAGCC AGGTGGTGTT TCCCGTCCCC
GCCAGCCTGC GCAGCGGGGA CGCGCTCGAG GTGATCCGGT GA
|
|---|
| Protein sequence | MQNAKPTTLS ARHGLVLLAV AGLLLSGCNN RRGNVEATTA TPTQAAPRVT KVRAVTLKEG
VLTVSRTAGA TLAPLRESNV ASSASGKVLA VLVEEGSRVG AGQTVLRLDD ATARTAVQNA
ELALEQARIN LERTSRSTEG SLAPLQAALQ AAQANLQVAQ RRYTEGQQLF RVGAIAQVEL
TSLEAALGQA KSNAENAREA LERAQRANRE DLALLRVQVQ QAEAQLAQAR RALADTEVKA
PFAGVVAEVY VNPGEFVAAG SRAFRLADVR RLEAKFRIPP SEAAKLAPGT GLNLDYGGQT
YFARLSRTSQ IPGTDRLVEA VATLQAPLPP GASASVRYTL EIAKGVIAPS GALLPGEQPR
VMLVENGKAK AVKVEILGDN GSQLALRGVS AGSQVVFPVP ASLRSGDALE VIR
|
|---|
| |