Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mesil_2158 |
Symbol | |
ID | 9251672 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Meiothermus silvanus DSM 9946 |
Kingdom | Bacteria |
Replicon accession | NC_014212 |
Strand | - |
Start bp | 2173500 |
End bp | 2175515 |
Gene Length | 2016 bp |
Protein Length | 671 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | TRAP transporter, 4TM/12TM fusion protein |
Protein accession | YP_003685537 |
Protein GI | 297566565 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.362569 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.151437 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGAGG ACAATCGTGC CTTGGAAATT GTAGAAGAGT CTGAGCTAGG GGGGCGTAAA CCCAAGGGTT ACAGCCGTTG GTTGATCTTC GCCGTCGCCG TTTCATGGAG CGTGTTCCAG CTGTGGGCTA CCTGGACTGG AACCCTGGAT CCGCTGAAGC TGCGCGCCAT CCACTTGGCT TTTGCCCTGG CCTTGGCTTT TTTGGTCTAC CCCTTTTCCA AAAAAAGCCC CAGGGATCGG GTTCCCTGGG CGGACTGGCT GCTGGCGGGT TTGGGGGTGG CCGGGGCGCT TTATGTGGTG GTGGAGTACT ACGGCATTAC CCAGCTGCGG GGTGGGGTGC CGAACCAGCT CGACAGCGTC ATGGCTACCC TGACCGTGTT GGTTTTGTTG GCGGCCAGCT GGCGTGTTTT AGGCAAAGCA CTACCGATCA TCGCCGCGGT TTTTTTGTTA TATGCCCTCA CCGGTCCTAA GGGGACGTTT CACTTCAGCC TGCCTTCTTT TTTACAGCTC CATGCCGGGT TTACCTGGCC TCAGGCGGTA GGCCAGCTCT ACCTGACTAC CGAGGGGCTG TGGGGTACGC CTATCGGGGT CTCGGCTACG TTTGTGTTTT TGTTTGTGCT TTTCGGGGCG CTCTTGGATA AGGCCGGGGC CGGTCAGTTC CTGATCCAGA TTGCCTACAG CTTGCTGGGA ACCTTCCGGG GTGGCCCAGC CAAGGCCGCA GTGGTGGCCT CGGGGCTGCA CGGTATGGTC TCGGGCTCCT CGGTTTCCAA CGTGGTCACG GTGGGAACCC TAACCATCCC GCTGATGAAG CGGGTGGGTT ACCCTGCCGA GACCGCTGGG GCCATCGAGG TAGCGGGGGG TTCCAACGGG CAGCTCATGC CCCCGGTGAT GGGAGCGGCG GCTTTCATCA TGGCCGAATA CCTCTCCATC CCCTACAGCC AGCTCATCGT GTATGCCGCT GTGCCCGCGG TGTTGGCCTA TGCCACCCTT TTCGTGGTGG TGCACCTCGA GGCCTTACGG CTGGGTCTCA AGGGGGTTCC GCGTTCGGAG TTGCCTGCCG CGGGGCCCAT TCTGCGCAGC GGGTTCCATT ACCTGATCCC CCTAGGCTAT CTGATCTATA GCCTGGTGGT CGTCCACATG ACCCCCGAGC GGGCTGCTTT TAACACCGTG CTGCTGATCG GCCTGTTGAT TTTCCTACAG GAGGCCTGGC GGGCTTTGCG CGGCGGTCAG GGAGCGCTGC ACGGCCTGCG ACGGGGGGCG GGGCTGATTT TGGAGGGCCT CGAGGCGGCG GGGCGGGGCA TGGTGGGGAT TGCCTTGGCT ACCGCCAGCG CGGGGATCAT CGTAGGCGTA GTGACCATCA CCGGAATCGG TTTCGGCCTT TCCGATATCG TTCAGGCCCT ATCCATGGGC AATATCATTG CGGTACTGGT GATGACCCAG ATCATCTGCC TGATCTTGGG GATGGGACTT CCCACCACCG CCAACTACAT CGTCATGGCC AGCCTGGTGG TACCCGTGGT GCTCAACCTG GCGGAGAAAT CTGGCCTCCA GGTACCTGCG GTGGCCGCCC ACCTCTTCGT GTTTTACTTC GGCATCATGG CCGACTCTAC CCCGCCCGTG GCGCTGGCGG CTTACGCCGC GAGTGCCATT GCCAAGTCAG ATTTCTGGCG CACCGGGGTA CAGGGCTTTA TCTATGAAAT GCGCACTGCC TTCTTGGCCT ACATGTTCTT CTTCAATCCC AAGCTGCTAT TGATCGGGGT GAACGGTTTC TTGGATGGGC TCGAGGTGGT GCTTTCGGGA TTTGTGGGTA TGGTCGCTTT CGCTTCGGGG GTGATGGGTT TCTTGCACCG CCCGCTGGGC CTGCTGCAGC GGCTTTTGTT GCTAGGAGCG GCAGTGGCTT TGGTGACCCC GGGCATCCAG AGTGACCTGG TCGGAGCCGG ATTGTTGTTG TTGGTCTACA TTTGGCAGCG GATGGCCTCG GCTCGAGCCG AGCTTCGGCA AGGCTCCAAC TCCTAA
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Protein sequence | MAEDNRALEI VEESELGGRK PKGYSRWLIF AVAVSWSVFQ LWATWTGTLD PLKLRAIHLA FALALAFLVY PFSKKSPRDR VPWADWLLAG LGVAGALYVV VEYYGITQLR GGVPNQLDSV MATLTVLVLL AASWRVLGKA LPIIAAVFLL YALTGPKGTF HFSLPSFLQL HAGFTWPQAV GQLYLTTEGL WGTPIGVSAT FVFLFVLFGA LLDKAGAGQF LIQIAYSLLG TFRGGPAKAA VVASGLHGMV SGSSVSNVVT VGTLTIPLMK RVGYPAETAG AIEVAGGSNG QLMPPVMGAA AFIMAEYLSI PYSQLIVYAA VPAVLAYATL FVVVHLEALR LGLKGVPRSE LPAAGPILRS GFHYLIPLGY LIYSLVVVHM TPERAAFNTV LLIGLLIFLQ EAWRALRGGQ GALHGLRRGA GLILEGLEAA GRGMVGIALA TASAGIIVGV VTITGIGFGL SDIVQALSMG NIIAVLVMTQ IICLILGMGL PTTANYIVMA SLVVPVVLNL AEKSGLQVPA VAAHLFVFYF GIMADSTPPV ALAAYAASAI AKSDFWRTGV QGFIYEMRTA FLAYMFFFNP KLLLIGVNGF LDGLEVVLSG FVGMVAFASG VMGFLHRPLG LLQRLLLLGA AVALVTPGIQ SDLVGAGLLL LVYIWQRMAS ARAELRQGSN S
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