| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mesil_1894 |
|---|
| Symbol | |
|---|
| ID | 9251406 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Meiothermus silvanus DSM 9946 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014212 |
|---|
| Strand | + |
|---|
| Start bp | 1888983 |
|---|
| End bp | 1890983 |
|---|
| Gene Length | 2001 bp |
|---|
| Protein Length | 666 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | Integrase catalytic region |
|---|
| Protein accession | YP_003685277 |
|---|
| Protein GI | 297566305 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.6802 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTTCACTG AGGTGATCGC TGAGATTCGG CCTGACGGGG GCAGTGGGAA GGGCGGGCTT
TACTTCGATG TAGATACCCT CATTCCGGTC TTTGGTCACC CGGTCAATCC TCTCCCCAAA
ACTGAAGCCC CGGCTCCTGT GAGTGCAGCC CCGCTGGTTG CTGTGGCTCC GCCGCTCGAG
CCTTACGCTC CCCGTCCCCT CACCCCCATG CCCGACCTGC GCCAGGCCAA CCCCGAGGGG
CTGGCCTGGG CCACCCGTGT GGACACCCTG GCCCGCGAGC TGGTCGCGGT GCCGCGTGGA
GGGCGGCTTC AGCGGCTCCA GGCTTTCGCC AAGCAGGAGG GGGTCACGCT TAAAACGGTG
TACCAATGGC TTGCCAAGCT GAAGCGGAAC GGCGTGCTGG GCCCGGTCAG GCTCAAACGG
GCTGATGCCG GGAAGAGCCT GATCCCTCCG GAGACGGAGA GCGTACTGAT GAGCCTCTGG
CTCCATCACC CCAACTTCTC CGCCGGGCGC ATCCGCCGCC TGCTGGAACT CGGGGCGCCC
GAACTCCTGA CCTACCGCCA CGGTAGCAGG TGCCGCACCC TATCCGAGCG TGGTATCCGC
GACGTGCGCC GCCGCATGGA GGCCGACCCG CGGATGCGGG TGGCGCTGAT GGATGAAGAC
CAGCGCCGGG AGTTTTTGCG CACCTGGGCT GGGCGGGTCG TTGCTGAGCA TGCAAACGAT
TTGTGGGAGG TGGACTTCAC CCGCTGTGAC ACCTTCGTCT TCGACCCGCA GGAGTACTGG
CGCACCGGCA AGCTCACCCC CTATCGCCTG CGCATCCACG CCGCCCTCGA CGTGGCCAGC
GGGTGCGTGC CGGCGATGGT CCACTCGCGG CTGGAGAGCC AGCAGCCCAC CAGCCGCATG
TTTGCCCTGG CTATGCTGCC CAAGCCCGAG GTCAACGACT GGCACCTGCG CTGGCCGATC
TGGGGCCGGC CACGCCGGGT TTACAGCGAC AACGGCAAGG TGTATCTGTC GGAGACTACA
CTGCGGGGGC TGAGTGCCCT GCAGATCGAG CACGTGCGCT CGCGGGCCTG GGTCAGCCAC
ACCCGTGGGG CGATTGAGCG GTTTTTCGAG ACCTTCCACC GGGGCTTCGA GCGGGCACTG
CCCGGCTACG CCGGGGAAGA CGCCAGCCGC CGCAGCAGTT GGGAGCTGGA GCGGTTAACG
CGGAACACAC TTCGCTGGCT CGAAGCCGGA GCCCCCGCCG ACCAGGACCC GGGCCCCGAC
CGGCTGCTGA GCGAGGCCGA GTATATGCAG CAGGCCCTAC TCTGGCTGAC GATGGACTAT
CACAAACAGG CCCTTCCCGG TGGCAAGTCC CGGGAGGAGC TGTGGCGGCA GAGCGTGCCC
CAGAGCAGCC TTGTGCAATT CAGCTTGATC GATTTATTCA AGATCTTCAG CACGGCCACC
GAGCGCACGG TGGCCGGGAA CGGGACGATC CGCTACAACA ACATGACCCT GGCCCTCGAG
GACGGCTCCC TGATGGCGTA CCAAGGCCAG CGCGTGGTGG TGCTCGAGAT CGAAAACCCG
CTAACCGGAG AGCCGGCATA CTCGCTGCAG CTCCCGCGCC CCGACGGCAC TCTGGCCGAG
CTGGGGTGGG CGGTAGAGGT GGACGGTCCC GCGCTGTCGG AGCGTGCCCG CGCCCACCGC
CAGGCCACCC GGGCGCAAGC CCGGGCGCTG TTGCGGGAGG CCGAGGACCT CAGGGCACGC
TACCTGGATC CCACCTGGCG GCAGGACACC ATCCTCAGCC GCTCGGCCCA GGTGCCCCTC
GAGCGCATCT CGCTCCCTGC CCCAGGCCCT AAGGTGGTGC TGGACCAGGG CGATACCCCG
CAGGCCCAGC AGCGGCGCCA GCAGCTCGAG CTAGAGCGGC AGGCCCAAGA CGACCCGCTG
CTGCAGAGCA TTCTCACCCT CATGAATCCA ACAGCACCGT TGTCGGACGG TGCTGAGGAG
AAAGAAAGGA GACAACTGTG A
|
|---|
| Protein sequence | MFTEVIAEIR PDGGSGKGGL YFDVDTLIPV FGHPVNPLPK TEAPAPVSAA PLVAVAPPLE
PYAPRPLTPM PDLRQANPEG LAWATRVDTL ARELVAVPRG GRLQRLQAFA KQEGVTLKTV
YQWLAKLKRN GVLGPVRLKR ADAGKSLIPP ETESVLMSLW LHHPNFSAGR IRRLLELGAP
ELLTYRHGSR CRTLSERGIR DVRRRMEADP RMRVALMDED QRREFLRTWA GRVVAEHAND
LWEVDFTRCD TFVFDPQEYW RTGKLTPYRL RIHAALDVAS GCVPAMVHSR LESQQPTSRM
FALAMLPKPE VNDWHLRWPI WGRPRRVYSD NGKVYLSETT LRGLSALQIE HVRSRAWVSH
TRGAIERFFE TFHRGFERAL PGYAGEDASR RSSWELERLT RNTLRWLEAG APADQDPGPD
RLLSEAEYMQ QALLWLTMDY HKQALPGGKS REELWRQSVP QSSLVQFSLI DLFKIFSTAT
ERTVAGNGTI RYNNMTLALE DGSLMAYQGQ RVVVLEIENP LTGEPAYSLQ LPRPDGTLAE
LGWAVEVDGP ALSERARAHR QATRAQARAL LREAEDLRAR YLDPTWRQDT ILSRSAQVPL
ERISLPAPGP KVVLDQGDTP QAQQRRQQLE LERQAQDDPL LQSILTLMNP TAPLSDGAEE
KERRQL
|
|---|
| |