| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mesil_1617 |
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| Symbol | |
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| ID | 9251122 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Meiothermus silvanus DSM 9946 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014212 |
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| Strand | - |
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| Start bp | 1616102 |
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| End bp | 1617175 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | |
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| Product | tRNA pseudouridine synthase D TruD |
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| Protein accession | YP_003685011 |
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| Protein GI | 297566039 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0830625 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATTCCCG ACCTGACCTT CGACTTTGAC CGCTACCCCT ATCTCTGCGC CGACCTAACG
GGGACGGGGG GGCGTATCCG CGGGGAAAAC CGAGACTTCC AAGTAGAAGA AGTCCCCGCC
TACACGCCCT CGGGGGAAGG CGAGCACCTC TACTTGTTCG TGGAGAAGGA GGGGCTTACT
ACCCGGGCCG TCTTCGAGTT TATCCGGGAC GCCCTGGCCA TCCCCGAAGC GGGGATTGGC
GTGGCCGGGC TCAAGGACAA ACGCGCCCTA ACGCGGCAGT GGATCAGCAT CCCGGCCAAG
TACGGGGGGC GGGTAAAGGG CCTCGAGGGG CTTCCCGGAG TGCGCGTCCT CGAGCAGGGT
CTCCACACTA ACAAGCTGCG CATCGGGCAC CTCCGGGGAA ACCGCTTTCG CATCCTGATC
CGAGATGTAG CCGTCCAAGA CGCCAAATTC CTGGCGGAAG CGGTCCTGCG GCGGCTCGAG
GCCCAGGGCG TCCCTAACTA CTTCGGTCCC CAACGCTTCG GGATCGGCGG GCTGAACCCG
CAAAAAGGCT ATGAGCTGGT GAGTCGGGGC AAAGGCCGGG GTAACCCTTG GCTCAAGAAA
TTTCTCATCG CCAGCCTGCA AAGCCTGCTC TTCAACGACT GGCTGGCGCT CCGGCTGAAG
CGCGGCCTCT ACGACCGGGT AGTACGCGGC GACGTCGCCA AGAAGCACGA CTCCGGCGGG
GAGTTTGTGG TCGTAGACCC CGAACTCGAG AACCCCCGGG CCGCTCGGCT CGAGATCAGC
GCGATGGGGC CACTGTACGG GAAGAAATAC TTCGAGGCCG AAGCCGAAGC GCGGGCGCTC
GAGGACGAAA TCCTGGCCCG CTACGCCCTA CGCCGCGAGC AGTTCGCGGC CCGCAAGGGA
GCCCGGCGGG TGATCCGCTT TCCTCTAACC GAGTGGTCCG TGAACGAAGA CCCCCAGGGC
ATCTGGATCA GCTTTTTTCT CCCCAAGGGA GCCTACGCGA CCGCGGTGCT ACGCGAGGTC
ATGAAAACCA ACCCGGAAGC AGGCGAGATC GAGGCAGACG AGGGCGAAGC ATAA
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| Protein sequence | MIPDLTFDFD RYPYLCADLT GTGGRIRGEN RDFQVEEVPA YTPSGEGEHL YLFVEKEGLT
TRAVFEFIRD ALAIPEAGIG VAGLKDKRAL TRQWISIPAK YGGRVKGLEG LPGVRVLEQG
LHTNKLRIGH LRGNRFRILI RDVAVQDAKF LAEAVLRRLE AQGVPNYFGP QRFGIGGLNP
QKGYELVSRG KGRGNPWLKK FLIASLQSLL FNDWLALRLK RGLYDRVVRG DVAKKHDSGG
EFVVVDPELE NPRAARLEIS AMGPLYGKKY FEAEAEARAL EDEILARYAL RREQFAARKG
ARRVIRFPLT EWSVNEDPQG IWISFFLPKG AYATAVLREV MKTNPEAGEI EADEGEA
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