| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mesil_1367 |
|---|
| Symbol | |
|---|
| ID | 9250866 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Meiothermus silvanus DSM 9946 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014212 |
|---|
| Strand | + |
|---|
| Start bp | 1351459 |
|---|
| End bp | 1353192 |
|---|
| Gene Length | 1734 bp |
|---|
| Protein Length | 577 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | |
|---|
| Product | extracellular solute-binding protein family 5 |
|---|
| Protein accession | YP_003684768 |
|---|
| Protein GI | 297565796 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0090511 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.000580883 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA TCTTTGTTCT GGGCATGCTG GTGCTAACGG GCTTGGTCCT GGCGCAGCCC
AAGGTGTTCA AGGGCACCGA GATCGGGAAG CCGGGCGGTT CGCTGCGCAT CTCTTCGATC
TCTGACCCGC GCACCTTCAA CCCCTTTGTG GCTAGAGAAA CATCCTCGAC CGACATCATC
AACAACTTCT TCCCCTACCT CACCGGCTAT AACCCCTACA CCCTGCAGCC CGAAGGTTTT
CTGGCCACCT CCTGGGAGGT GCGCAACAAC GGGCTCACGG TGATCTTCAA GCTGCGCCAG
GGGGCCAAGT GGTCGGATGG GCAGACCATC GATGCCGACG ATGTAATTTT TAGCGCCACC
GTCCACGCCG ATCCCAAGGT GAACTCCAAC AGCCGCTCGA GCTTCGTCCT CGATGGCCAG
CCGATCAAGT GGAGCAAGGT CGATCAGTAC ACGGTGCGCG CGGACTTCCC CAAGCCCTAC
GCCCCGGCTT TAATCCAGAG CTGGCTCATC GCCCCCGAGC ACATCTTCGG CCCGGCCTAC
CGCCAGGGGC CGGAGAAGCT GCAAGCGCTC TACAACCTGG ATACCCCGCC GGCCCAGATC
GTGGTGGGCG GCCCCTTTAC CCTCGACCAG TACGCCAAGG GCGAGCGGGT GGTGCTCAAG
CGCAACCCGA GCTACTGGGG CACCGACGAG AAGAGTAACC CAGTAGCCTA CCTGGAGCGC
TGGACCTTCC AGATCGTCTC CAACACCGAA GCCCAGCTGG CCCGCTTCCT GGGTGGGGAT
GCCGACCTCT ACGCCGCCCC CGACGGCGAC AAGGTGGCCC AGGTGCTGGA GCGCATCCGC
TCAGGCCGCC TCAACGCTCA GATCTTCCCC AACGCCGACG TGACCACCGG CACCAACTTC
ATCGTCTTCA ACTGGAACAA CAAGGATCCG TTCAAGGCCA ACCTCTTCCG CCAGGTGAAG
TTCAGAAGGG CCATGGCTCA CCTGATGGAT AAGAAGTCCA TGATCGAAGT GGCCCAGGGC
GGGCTGGGGC GTCCGCAGTG GAGCCCTATT TCGATTCCCG TCAAGCAGTT CTTCACCGAC
GACGTGGCCA AGTACGAGTT CAGCCCGCAA AAGGCCACCC AGCTCCTGGC CGAACTCGGC
TTCCGCACCA AGAACAAAGA CGGCTTCTTA GTGAATGCCC AGGGTCAGGT GCTCGAGTTC
AACCTGGCCA CCAACCAGGG CAACACCCTG CGCGAGCGGA TCGCCCAGAT CTTCGCCGAT
GAGGCCCGGA AGGTCGGGGT CAAGGTCAAC TACCGCCCCA TCGACTTCAA CGAGCTGGTG
CGCCAGCTCA CCAGCCCCGC TGCCGACGGC ACCCGGGAGT TCGACGCCAT CCTCATCGGC
CTCACCGGAG GTATCGAGCC GGCCTTTAGC CGCAACGTGT GGCAGCTCAA CGGCTCGCTG
CACATGTGGA ACCTGGGGAT GAACGGGCAG AACCCCACCC GCCTCGAGCC GTTCGAGGTA
CTCATTGATA AGCTGATGAC CCAAGGGGCT ACCACCCTCG ATCCGGCCAA GCGGCGCGAG
ATCTACGTGC AGTTCCAGAA GGTGGTGGCG GAGAACTTGC CGGTCATCTA CACCGTGGCC
CCGGCCTATA ACCCGGCCCG CCTCAACCGC ATCGGCGGTC TCTTCGGCAA GGAGGAGATC
AACGCCATCG TCGGGCAGTA CCCCTACATC GAAACGGTCT TCGCCAAAGA ATAA
|
|---|
| Protein sequence | MKKIFVLGML VLTGLVLAQP KVFKGTEIGK PGGSLRISSI SDPRTFNPFV ARETSSTDII
NNFFPYLTGY NPYTLQPEGF LATSWEVRNN GLTVIFKLRQ GAKWSDGQTI DADDVIFSAT
VHADPKVNSN SRSSFVLDGQ PIKWSKVDQY TVRADFPKPY APALIQSWLI APEHIFGPAY
RQGPEKLQAL YNLDTPPAQI VVGGPFTLDQ YAKGERVVLK RNPSYWGTDE KSNPVAYLER
WTFQIVSNTE AQLARFLGGD ADLYAAPDGD KVAQVLERIR SGRLNAQIFP NADVTTGTNF
IVFNWNNKDP FKANLFRQVK FRRAMAHLMD KKSMIEVAQG GLGRPQWSPI SIPVKQFFTD
DVAKYEFSPQ KATQLLAELG FRTKNKDGFL VNAQGQVLEF NLATNQGNTL RERIAQIFAD
EARKVGVKVN YRPIDFNELV RQLTSPAADG TREFDAILIG LTGGIEPAFS RNVWQLNGSL
HMWNLGMNGQ NPTRLEPFEV LIDKLMTQGA TTLDPAKRRE IYVQFQKVVA ENLPVIYTVA
PAYNPARLNR IGGLFGKEEI NAIVGQYPYI ETVFAKE
|
|---|
| |