| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mesil_1337 |
|---|
| Symbol | |
|---|
| ID | 9250833 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Meiothermus silvanus DSM 9946 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014212 |
|---|
| Strand | - |
|---|
| Start bp | 1323001 |
|---|
| End bp | 1324005 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | |
|---|
| Product | 3-isopropylmalate dehydrogenase |
|---|
| Protein accession | YP_003684738 |
|---|
| Protein GI | 297565766 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0443699 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.850661 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCGAG TTTATCGAAT CTGCTTAATT GAAGGCGACG GTATCGGCCA CGAAGTAGTC
CCGGCAGCCA GGCACGTGCT CGAGGCTACC GGGCTCAAGT GTGAGTTCGT GGAGGCTGAG
GCAGGCTGGG AGACCTTCGA GCGAAGAGGT ACCTCGGTGC CCGAGGAGAC CGTAGAGATT
GTCAAATCCG CCGACGCCAC CCTCTTCGGA GCCGCTACCA GCCCTACCAA GAAAGTAGAG
GGCTTTTTCG GGGCTATTCG CTACCTGCGC CGCCGGCTAG ACCTTTTCGC CAATGTGCGT
CCGGCCAAGC ACCACCCGGT TAAAGGCTCC ACCCCGGGAA CCGATTTGGT TGTGGTGCGC
GAGAACACCG AGGGGCTTTA TGTTGAGCAG GAGCGCCGCT ACGCCAAAGG CAAGGTGGCG
ATCGCCGACC GGGTCATCAC CTACGACGCC AGCTATCGGA TCGTGGAGTA CGCCCTCAAG
CTGGCCCGCA CCCGCCGCAA GCAACTGGCA CTGGTGCACA AGGCCAACGT CCTGCCGCTT
TCTGATGGGC TTTTCCTCGA GGCCGCCTAC GACGCCGCCA AACACTATCC CGATATCCAG
GTTTCCGAGG TGATTGTGGA CGCCTGCGCC ATGCGGCTGG TGCGCAACCC ACAGAGCTTC
GACGTGCTGG TAATGGAAAA CCTCTTTGGC GATATCCTCT CCGACCTCAC CGCGGGGCTG
GTAGGTGGCC TGGGTATCGC GCCCTCGGGC AACATCGGCG AGCAGGCCGC CATCTTCGAG
CCGGTACATG GTTCCGCCCC GGACATCGCC GGGAAGGGGG TCGCCAACCC TACCGCCGCC
ATCCTCTCAG CGGCCATAAT GCTTGACTAT CTGGGGGAGC ACGAAACCGC TCGCCGCATC
GAGAAAGCCG TAGACATAAC CCTCGAGCAA GGCCCCCTTA CCCCTGACTT GGGGGGCAAA
GCAGGCACGC TCGAGTTCGC CAAGGCCGTC GCTGCTGCGC TTTAG
|
|---|
| Protein sequence | MSRVYRICLI EGDGIGHEVV PAARHVLEAT GLKCEFVEAE AGWETFERRG TSVPEETVEI
VKSADATLFG AATSPTKKVE GFFGAIRYLR RRLDLFANVR PAKHHPVKGS TPGTDLVVVR
ENTEGLYVEQ ERRYAKGKVA IADRVITYDA SYRIVEYALK LARTRRKQLA LVHKANVLPL
SDGLFLEAAY DAAKHYPDIQ VSEVIVDACA MRLVRNPQSF DVLVMENLFG DILSDLTAGL
VGGLGIAPSG NIGEQAAIFE PVHGSAPDIA GKGVANPTAA ILSAAIMLDY LGEHETARRI
EKAVDITLEQ GPLTPDLGGK AGTLEFAKAV AAAL
|
|---|
| |