Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mesil_0842 |
Symbol | |
ID | 9250333 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Meiothermus silvanus DSM 9946 |
Kingdom | Bacteria |
Replicon accession | NC_014212 |
Strand | + |
Start bp | 835427 |
End bp | 839215 |
Gene Length | 3789 bp |
Protein Length | 1262 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | DNA polymerase III, alpha subunit |
Protein accession | YP_003684263 |
Protein GI | 297565291 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.888931 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCCGG TTCTGGCTTA TGCTATAGCC AGAATGTTGC ACGACCCAGC CAACCCCACC CACCGCGACG ATTGCCCTTC CTGCCAATTC GCCCACTTGC ACCAGCACAC CCAGTTCTCG CTTCTGGACG GCGCGGCCCG CCTCAAGGAC CTCATCAAGT GGGTCAAGCA GGTAAGCCCT GAGGAGCCCA TGCTGGCTAT GACCGACCAC GGCAACCTGT TCGGGGCCGT GCAGTTTTAC AAGTACGCCA CCGAGGCCGA GGTCAAGCCC ATCATCGGCT ACGAGGCCTA TGTGGCTGCC GAGAGTCGCT TCGACCGCAA GCAGGGGAAA GGGCTCGACG GGGGCTACTT CCACCTCACA TTGCTGGCCA AGGACTTCGA GGGCTACCAG AACCTCTGCC GCCTGGCCAG CCGGGCTTAC CTCGAGGGCT TCTACGGTAA ACCCCGCATC GACCGGGAAA TCCTGCGCGA GCATAACGCG GGCATCATCG CGCTTTCGGG CTGCTTGGGG GCGGAGATCC CGCAGTTCAT CCTGCAAGAG CGCCACGAGG ATGCCGAGCG GCGCCTGCTG GAGTACCTCT CGATCTTTGG GGATAAGCGC TATTTCATCG AGGTTCAAGA CCACGGCCTC CCCGAGCAGA AGAAGGTCAA CCGGGTGCTT AAGGAGTTCG CCGACAAATA CGGTCTGGGC ATCGTAGCTA CCAACGACGG GCACTACGTG CGCAAAGAGG ACGCCGAGGC TCATGCGGTG GTGCTGGCGG TGCAGTCGAA GGCTACCTGG GACGATCCTA ACCGCTGGAA GTTCCCCTGC GACGAGTTCT ACGTCAAAAC CCCCCAGGAG ATGCGCTCTA CCCTCGAGGG CGAACGCGAG CTATGGGGTA AGCGCTTCGA TGAGCTGTTC GATAACTCGC TCGAGATCGG GCGCATGTGC AACGTCGAGC TGGTACCCAA GAAGGTGCAG TACCGCATCC CCAAGTACCC CCTACCCGAG GGGCGCACCG AGGTGACCTA CCTCCGCGAG CTCACCTTCA GTGGCCTCCT CAAGCGCTAC CCCGACAGGG TCACCGACGA CCTCTACCGC GAGTTCCTGC GCAGGCTGGG CCGGCCGGTG CCCCATGGTG ACGGGGAGGT GTTGGCCAAA GCCCTGGCCG AACTCGAGGA CCTCGAGGCC ACCCGCGCCT ACCTGCCCGA ACTCAAGGAG GGCACCCCGT GGGGGCCTTG GGAGATCCTC TCCCGCGCCG TCTACGAGCT CGCCGTGGTC GAGCGCATGG GCTTCCCCGG TTATTTACTT ATCGTGCAGG ACTTTATCAA CTGGGCCAAG AGCCAGGGCA TCAGCGTAGG GCCGGGACGT GGCTCGGCGG CAGGGAGCTT GGTGGCGTAC GCCACCCGCA TCACCAACAT CGACCCGCTA GCCTATGACC TGCTCTTCGA GCGCTTCTTG AACCCGGCCC GAGTCTCCAT GCCCGACATC GACACCGACT TCTCCGATGC GCGCCGCGGT GAGGTCATCG AGTACGTGCG GTCTCGCTAC GGCGATGAGA TGGTGGCGCA GATCGGAACG TTCGGAACCT TGGCCTCCAA GGCCGCCATC AAGGACGCGG CACGGGTCTT CGGGTTGCCG GTGAAGAAGG CTGACGAGTT GGCCAAGCTT ATTCCGGTGG TGTTCGGCAA GCCCACGCCC TTAGAGAAGG CCATCGAGAC CATCCCCGAC CTCAGGGCGG AGATGGAGAA AGACCCCCTG GTAGCGCGGG TGATGGAGGT GGCGAAGAAG CTCGAGGGCT TGAACCGCCA GTCCAGTGTG CACGCGGCGG GGGTAGTGAT CTCGGATGTG CCGCTTCAGG ACTATATCCC CCTGATGCGG GCGGGCGATG GCGAGGGCAA GGTCACCCAG TACGACATGG GCTCGGTGGA GGCCTTGGGA TTCCTCAAGA TGGACTTTTT GGGCCTGCGC ACGCTCTCTT TCCTCGACGA GTGCAAGCGC ATCGTGAAGG AATCCAAGGG CGTAGACATC GACTATGACG CTATTCCCAT CGACGATGAG AAGACCTTTG AGCTGTTGGG GCGTGGCGAG ACCAAGGGCA TCTTTCAGCT CGACTCGGCC GGCATGACCT CCACCGTGCG CGGGCTCAAG CCGCGGCGCA TCCAGGACAT CATTGCGTTG GGGGCTTTGT ATCGCCCCGG CCCGATGGAA AACATCCCCA CCTACATCCG CCGCCACCAT GGGCGGGAGG CGGTGGCCTA CCCGCAGTTC CCCAACGCGG CCAAGTACCT CGAGCCCATC CTGCGCGAGA CCTACGGGAT CCCGGTCTAC CAGGAGCAGA TCATGCAGAT CGCCTCGGCG GCTGCCGGGT ACAGCCTAGG CGAGGCCGAT TTGCTGCGGA GGGCGATGGG CAAGAAGAAG ATGGAGGAGA TGGTCAAGCA CCGCGCCCAG TTCAAGAAGG GTGCGGCACA GCGGGGCATT CCCGAGGACG AAGCCGACCG GCTCTTCGAC CTGCTCGAGG CCTTCGCCAA CTACGGCTTC AATAAGTCGC ACTCGGCAGC TTACGCGATC CTTACCTACC AGACCGCCTA CGTCAAAGCC CACTACCCGG TGGAGTTCCA TGCGGCCTTG CTCACCGTCG AGCGCCACGA CTCGGACAAG GTGGCCGAGT ATATCCGGGC CGCGCGAGCG ATGGGGGTGG AGGTGCTGCC GCCGGACATC AACCGCTCCT CCTTCAGCTT CAGCGCGGTC GGCCAGAACG TGCTGTTCGG GCTTTCGGCG GTAAAGAACG TAGGGGAAGC GCCTACCGAG GCCATCATTC GCGAACGCGA GCGGGGAGGA CGCTTCAAAT CCCTGCCGGA CTTTCTCAAG CGGGTAGACT CCGCCGTCGC CAACAAACGG GTGGCGGAGT CGTTGATCAA AGCCGGGGCT TTTGACGAAT TGGGCGAGCG TGGGCAGATG CTCGCCGCCC TCGACGACCT GCTCAAGTGG GCCCAGGCCG AGCGCGAGAG CGCCAACTCG GGCATGATGG GCCTCTTTGC TGATGCTCAA AGCGAGCCCA CTTTGCCCAA AGTGCCCCCC CTGGATGAGA TCACCCGGCT TCGCTACGAG AAGGAGGCCC TAGGCATCTA CGTCACCGGC CACCCGCTTC AGCGCTACGA GGGGCTGCGC GAGGCCGCCA GCTGCACTAT TGAGGACCTC CCCGACTACT TCCACAGCCA GAAAAACGGC AAGTCCCGCA TCCGGGTGCT CCTGGCCGGG CTCGTTGAGG GCATTGTCCG CAAGCCCACC AAATCCGGGG GGATGATGTG CAAGTTCATG CTGGGGGATG AGACCGGTGC GGTGGAGGTG GTGGCCTTTG GGCGCTCGTA TGACAAGGTC TCGCCGCGGG TGCGCGAGGA TGCCCCGGTG TTGCTGGTGG CCGAGGTGGA GCCGGACGGA GAAGGGGAAA CCTTACGGGT GGTGGCCCAG GACGTGTACC CCTACAACGA ACTCGAGGGA CTCCCCAAGG TGATGGAACT CGAGCTGGAC CTAGCCCTCC TGGACGATGA GAAGATCAAC GAATTGGGGA GCCTTTTTGA CGAGTACACC GGCCTCGTGC CGGTGCATCT AAAAATTCAA GGTAGCGATT GCTGGGCTTT GATAGAGGTC CGGCCTCGTG TAGACGAGAA TGCCAAGGAT GCCTTGGCCG GACTCGACTG GGTGAGGGCC AAGCTGATCC CCGACCGGGA CGCCCTGCTG GCGGTGGCGG CAGCCCCGGC TCGAGGGCAG AACGGCGGCG ATCCCCAAGG GCCGGTGGTG CCGTTTTAG
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Protein sequence | MPPVLAYAIA RMLHDPANPT HRDDCPSCQF AHLHQHTQFS LLDGAARLKD LIKWVKQVSP EEPMLAMTDH GNLFGAVQFY KYATEAEVKP IIGYEAYVAA ESRFDRKQGK GLDGGYFHLT LLAKDFEGYQ NLCRLASRAY LEGFYGKPRI DREILREHNA GIIALSGCLG AEIPQFILQE RHEDAERRLL EYLSIFGDKR YFIEVQDHGL PEQKKVNRVL KEFADKYGLG IVATNDGHYV RKEDAEAHAV VLAVQSKATW DDPNRWKFPC DEFYVKTPQE MRSTLEGERE LWGKRFDELF DNSLEIGRMC NVELVPKKVQ YRIPKYPLPE GRTEVTYLRE LTFSGLLKRY PDRVTDDLYR EFLRRLGRPV PHGDGEVLAK ALAELEDLEA TRAYLPELKE GTPWGPWEIL SRAVYELAVV ERMGFPGYLL IVQDFINWAK SQGISVGPGR GSAAGSLVAY ATRITNIDPL AYDLLFERFL NPARVSMPDI DTDFSDARRG EVIEYVRSRY GDEMVAQIGT FGTLASKAAI KDAARVFGLP VKKADELAKL IPVVFGKPTP LEKAIETIPD LRAEMEKDPL VARVMEVAKK LEGLNRQSSV HAAGVVISDV PLQDYIPLMR AGDGEGKVTQ YDMGSVEALG FLKMDFLGLR TLSFLDECKR IVKESKGVDI DYDAIPIDDE KTFELLGRGE TKGIFQLDSA GMTSTVRGLK PRRIQDIIAL GALYRPGPME NIPTYIRRHH GREAVAYPQF PNAAKYLEPI LRETYGIPVY QEQIMQIASA AAGYSLGEAD LLRRAMGKKK MEEMVKHRAQ FKKGAAQRGI PEDEADRLFD LLEAFANYGF NKSHSAAYAI LTYQTAYVKA HYPVEFHAAL LTVERHDSDK VAEYIRAARA MGVEVLPPDI NRSSFSFSAV GQNVLFGLSA VKNVGEAPTE AIIRERERGG RFKSLPDFLK RVDSAVANKR VAESLIKAGA FDELGERGQM LAALDDLLKW AQAERESANS GMMGLFADAQ SEPTLPKVPP LDEITRLRYE KEALGIYVTG HPLQRYEGLR EAASCTIEDL PDYFHSQKNG KSRIRVLLAG LVEGIVRKPT KSGGMMCKFM LGDETGAVEV VAFGRSYDKV SPRVREDAPV LLVAEVEPDG EGETLRVVAQ DVYPYNELEG LPKVMELELD LALLDDEKIN ELGSLFDEYT GLVPVHLKIQ GSDCWALIEV RPRVDENAKD ALAGLDWVRA KLIPDRDALL AVAAAPARGQ NGGDPQGPVV PF
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