Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mesil_0760 |
Symbol | |
ID | 9250251 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Meiothermus silvanus DSM 9946 |
Kingdom | Bacteria |
Replicon accession | NC_014212 |
Strand | + |
Start bp | 748627 |
End bp | 751029 |
Gene Length | 2403 bp |
Protein Length | 800 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | transcriptional regulator, SARP family |
Protein accession | YP_003684181 |
Protein GI | 297565209 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0281555 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGTTTGC GTACGCTGGG GGGGCTCGAG CTTTCCGGCT CCAACTTCCG CAAAGGGGCG ATCAAACCCC TGTTGCTGCT AGCGTATCTG GCGCTGGAAG GTCCTAAACC TCGGCGCTAC CTGGCCGAAC TGATCTGGCC CGAGGCTGCC GACCCTATGA ATAGCCTCAA GGTAGTGCTG CACAAGCTGC GCGGTTTGGG AGCTATCTCC GCCGATGAGG AACGGGCCTG GACTGCCCTC GAGTGCGATG CTGTGGAACT GCGCAACTGT TTGCGTTCAG GGAAGCTTAG AGGGGCGATA GAGCTGTATC AAGGGGCCTT TCTCGAGGGA GCCGAGGGGG ACTCGGGAGA GGAGCTGGAA GACTGGATCT ACACCACCCG CGAAGCCCTG GCCCACGAGG TGCGCCTGGC CTTGCTGGAG TTAGCCGAGC GCGAAGCCGC CTTGGGGCAG TTTGTCGCCG CTGCGGAAAA AGCCGAAGCC GCCTACCGAC TCCCTGGGGC CGCGCCGCTC GAACCCGAGG AGCTTCCACG GTTTTATCCG CTGTTGCTGG CGGGGAATAA CCCCTGGGCC GAGACGATCA AGCGCGAGGC CCAGGAACTA GGGGTGGAGC TGGCCCTCTC CGGCGAGGCC GCCCGGGGCC GCCTGCGCCA AAGCTTTGTT GGGCGGGAGC GCGAACTCGA GAAACTTTCC ACCCTCGAGC CTGGAGAGTG GGCTTGGGTA CGAGGTGGGG CTGCTACCGG CAAAACTGCC CTGCTGCGGC GGTTGGAGCG GCAGGGCGGG CTCTACTTAC CCGCCCGCCA GGGTTTGCCC TACGCGACGC TCGAGCCGTT ATTGGGCAGT GTGGAGGGTG GTCCAACGGA GCTATTGCGC CGCTTGGCGG GAATATCGGG TTTTTGGCTT TTCGACGGTT GGCACCGCAT GGATGCTGAG AGCCGCGAAC TCCTGACCCG CCTGCGCGGT CTGGGTAGCA GGGCTCGGGT GGTGATCGCC TCGAGGGATA GGCCCCCCCT CGAGGTGCAC TGCCTGCTCG AGCTGGGGCT GCTCTCCGAG GAGGAACTAA AACATTACCC CGGGGCCTTC GAGGCTACCG GTGGGGTTCC CGCCTTGGTG GGGGCTTTTT TACGAGAAGA GCCCTTGGAA GAAGCCCTGG ATACCCGCCT AGATGCTCTT TCCGAAGCCG CCCGCGAAAT TTATGCAGCG CTCACCCTGC TCGAGACCCC TAATCTTGCT GTCGCCCGCA AATCAGTAGG GTTGGGGCCT GCCGAAACTG CCCAGGCTTT GGAAGAGCTG CTCTCGGCGG GGTTAGTAGA GCCCTCAGGG GCGGTGCGGG CCAAGGGGGT GGCGCTGCGC TGGCTGACGG GTCGGCCTGC GCTCGAGGCC TACCTTATCT TGGCCCTAGC CCCCCTGCTT TCCGACCTTG AGGCTTTTCC CCTATACCAA CGGGCACGGA ATCTCACCGA CGGCAGCGAG CTACCGGGGA TGCACCGGGC TTACTTAGCC TGGGCGGGAG AACTCCTAAA GCGTGGTTTC CCTCAGCGGG CCGCCGAGGT GCTGGCTGAG CTAAGCCCCA CTCCCGAGCT GAGCCTGATG CGCTCCAGGG CTTTGGAGCG GGCTGGGCAG TACAAGGAAG CGCTCGAGGT ACTCTCAAGC CTGCCCGACA GCCCCGAGGT GCTGGCCCTC AAAGGAGCGC TCTTGTGGCG TTTGGGCAAG CCGGAGGAGG CACGAAACGC AGCCCAGCAG GCCCTCGAGG GGAATTCCAG GGCGAGGGCG GAAGCGCTGA ACACGTTAGG TCACCTGGCT TTTTCTGAAG GCAGGTTCGA GGGGGCCTCG ACTGATTTCC GCCGGGCGGC TGCTCTTTGG CGAACCTTGG GGGAGCATGA ACGATGGATT GGGGCTTTGA GCAATCTTGC CATTGCCCAA AGTGAACTAG GAGAGTCGAC AGAAGAAGCC TTTGCCGAAG TACTACACGC AGCGAGAGAT AATCCGGGCG TACGGTCTCG AGTTCTTCTC AATTTAGGCA ACGTGCACGA GCGGAGGGGT AACTTTGACG CGGCAGCCAA AAGCTACATA GAAGCGTCTG CACAAGCTTT GGAAGCGGGG GCGCTGGATA TCTCCGCTCG GGCCTGGAAC AATCTGGGGG TAGTGTTTCA TAAACAAGGT AGAGCCCAGG AAGCGGAGAA TGCCTACAGC GAAGCTTTGG CGCTTGCCCG TCAGGCGGGG GAATTGCGCC TGACGGGCAT GGCTTTGGGT AATTTAGCTG AATTGACACA AGACCTAGAT GTTCTAGAAG AGGCTATACA TTTACTTGAG AGGAGCGGAC ACACACAGGT GGCGGAAGGC TACAAGGCCC GGCTTGACGA ACTCAAGCTC TCTGGAAGCG GCCATGCCTC CCGGAGTACC TAG
|
Protein sequence | MRLRTLGGLE LSGSNFRKGA IKPLLLLAYL ALEGPKPRRY LAELIWPEAA DPMNSLKVVL HKLRGLGAIS ADEERAWTAL ECDAVELRNC LRSGKLRGAI ELYQGAFLEG AEGDSGEELE DWIYTTREAL AHEVRLALLE LAEREAALGQ FVAAAEKAEA AYRLPGAAPL EPEELPRFYP LLLAGNNPWA ETIKREAQEL GVELALSGEA ARGRLRQSFV GRERELEKLS TLEPGEWAWV RGGAATGKTA LLRRLERQGG LYLPARQGLP YATLEPLLGS VEGGPTELLR RLAGISGFWL FDGWHRMDAE SRELLTRLRG LGSRARVVIA SRDRPPLEVH CLLELGLLSE EELKHYPGAF EATGGVPALV GAFLREEPLE EALDTRLDAL SEAAREIYAA LTLLETPNLA VARKSVGLGP AETAQALEEL LSAGLVEPSG AVRAKGVALR WLTGRPALEA YLILALAPLL SDLEAFPLYQ RARNLTDGSE LPGMHRAYLA WAGELLKRGF PQRAAEVLAE LSPTPELSLM RSRALERAGQ YKEALEVLSS LPDSPEVLAL KGALLWRLGK PEEARNAAQQ ALEGNSRARA EALNTLGHLA FSEGRFEGAS TDFRRAAALW RTLGEHERWI GALSNLAIAQ SELGESTEEA FAEVLHAARD NPGVRSRVLL NLGNVHERRG NFDAAAKSYI EASAQALEAG ALDISARAWN NLGVVFHKQG RAQEAENAYS EALALARQAG ELRLTGMALG NLAELTQDLD VLEEAIHLLE RSGHTQVAEG YKARLDELKL SGSGHASRST
|
| |