| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mesil_0509 |
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| Symbol | |
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| ID | 9249994 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Meiothermus silvanus DSM 9946 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014212 |
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| Strand | + |
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| Start bp | 507038 |
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| End bp | 509407 |
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| Gene Length | 2370 bp |
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| Protein Length | 789 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | |
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| Product | Type IV secretory pathway VirD4 protein |
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| Protein accession | YP_003683950 |
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| Protein GI | 297564978 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.453337 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGTGG CCCGGCGGCA ATCCCTGCTG GAAGTTCCCG CCTCCCACAA GCTCCTGAAG
TTTCTGGGAG GCTTGGTCAT GCTTTCTACG CTGGCCCTGG TGGGCTGGCT CGGGTGGCAG
GCGGCGCTGG AGGTGGCTCG GGAAATGCTC CGGGCCGGGT GGGGCGGCCT TTTGCAGGCG
GCCTCGCCTG CAGAGCTAAT GCTCCGCTGC AACACCGACT TCCTGGGTAA TTGCAGCCAG
GTGTTCAACA CACAGTGGCA GAAGGCGCTC CCCCTGGACG CCTTGCGGCT GGTGGTGGCG
GGGGGGTTCG CCCTGGGGAT GCTCCCCTTT CTGGTTCGGC CATACCGCCC GCGCAAGAGT
CCGGGGCAGG GACGCTGGGC TACGGCCAGA GACCTCGCAG GCTACCTGGG GGAGAAGGGT
ACCGGATGGT ACGGCCTCTT CGAAGGCAAA CCGCTCCGGG TACCCCCCAT GGAGCGGCGC
ACCGGGACGC TGGTGGTGGG CAAGCCGGGT GGGGGCAAGA CCACCGGCTA CTACCAGCCC
AACCTGCTCC TGGACGCCAG GGACGGCTGG AGCGCCGTCG TATTTGACCT GAAGTGGCCC
GACGAAGGCG GGCTGATGGA GGCGGTGCGC TACTACCGCC ACTTCGGGCG GGCGGTGTAT
GCCTACACCC CCTTCACAGC AGACTCGGCC CGCATCGCCC TGCTGGAGGG GGCGGAGAAC
CCCCAGGAGG CCAGCAACAT TGCCGACATC CTGGTGCCAC GGGGAGCCGA CGGGGGGGCG
GAGTTCTACG CCAACCTCGA GCGGATGCTC CTGGCCGGGT TGATATGGGT GGAGGGGCAG
GAGGGGCGCT ACTCCCTGCG GCACATCCTG GAGGTGTTGC GCCAGGGCAA GGAGGAGCTC
AAAGCCTACG CTGAGGTCAG GCCCCACCTC AAAGAGCGCA TCGGAGCAGT GCTCCAGACC
CGCGAGGACA TCATCGCCGG GGTGGTGGCA GGGCTGGCAG GCAGGCTGGC CCTCTTCGAG
AACGACCATT TGGATCGCTC GAGCCTGCCG GGTGCAGGGG CGGTGCCCTG GCCTCGCCTG
TTCAGCGAGC CCAGCCTGCT TTACATCGGC ATCCCCCAGG AGCACCTGGA AGGGGGCAAG
GCCACGGCCC TCCTGTGGCT GGTCAAGCGG ATCATGGACC GGGAGATCCA CCGCGCCGCA
GCCCGGAACG GGGGGACGCT GAAGACGCTG ACCTCGGTCT ACCTCGACGA GTTCACGGCC
TTTGGGAAGC TCCCCGGCAT CGAGGACAAC CTCAAGACCA TGCGCAGCAG GGGAGCGGCC
TTCCACGTGA GCGTGCAGAA CCTGGCCAAC GGGCGCTCGG TATATGGGCG GGATGTGTGG
GAGAGCATTC AGGGGACGTT CGGGCAGCAG GTGTATCTGC TCGAGCGGCT CTCGGAGGAG
GATCGCAAGT GGCTCGCGCG CACCCTGGGC TATGAGACGG TGGTGGGCTA CTCCCGGAGC
TCTTCCAGGA GCGGCTTCCT CTCGGGCAGC GAGGGCGAGG GGGAACGGGA AGAGGCCCGC
TTCCTCTTAT CCGCTGAGGA GATGCGGGAG GTGAAGAAGG GCGAGACCGT GGTGATCCTC
GACGGCAAGC CGCCGGTGCG CACCTACCTG GGGGGGATGT GGGAGAAGCG CCACCCCCTG
TACGGGCTGT ACGAGAAGGC CCGGAAGGCG GCCAGGAAGG AGAGCACCCC GCCGGTATCA
CAACCTGAGA CCGTCACCGG CGGAGCCGCC CCTATGCAGG ATGAGTGCCT TGCGGTTGCC
ACCGGAGGGC AGCGGGCTGC TTTCCCGTCA GGGAAACACC TTGAGGCGAG CCCACTCACG
GACGATCCCC TGTCGGGACG GGCAGGGCCC GTACACCGAA CGGACGATCC CCTGTCGGGA
CGGGCAGGGC CCGTACACCG GGAGGCCAGT GACCCGCGCA GCCTCGAGGA CTACCTTCGT
CGCCTGACCT CTGTGATGCC GGTCTTCCAG CGTTACTACC ACAAGAAGAC CACCACCGGG
GTTCGTTTTG TGCTACCGGA GGGTTTCCCC GCGCCTGAGA CCGCCTGGGT GCGGGAGGGC
TGGATTGAGG TGCGGGGCAA GGAGGAGCTC TCCCTCAACC TCACCAGCCG GGGGCTGGAA
GTGCTGGAGA AGGGCTTCGT GGCCGCCTTG GTGCGCTGGT GCCGGGTGCG GGAGTGGGCG
AGGCGGCAGG GCCTGGACAG CCAGGCCGAG GTCTACATGG GCGAGGAGGA GGCCGAAACC
GTCCTGCGGG AGTGGGCGAG GCGGCTCCCC AAGGAAGAGG GGCGGGTGCA GGTCAGGGTT
TCGTTGGAGG CGCTGGGCGA TGAGGCTTGA
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| Protein sequence | MSVARRQSLL EVPASHKLLK FLGGLVMLST LALVGWLGWQ AALEVAREML RAGWGGLLQA
ASPAELMLRC NTDFLGNCSQ VFNTQWQKAL PLDALRLVVA GGFALGMLPF LVRPYRPRKS
PGQGRWATAR DLAGYLGEKG TGWYGLFEGK PLRVPPMERR TGTLVVGKPG GGKTTGYYQP
NLLLDARDGW SAVVFDLKWP DEGGLMEAVR YYRHFGRAVY AYTPFTADSA RIALLEGAEN
PQEASNIADI LVPRGADGGA EFYANLERML LAGLIWVEGQ EGRYSLRHIL EVLRQGKEEL
KAYAEVRPHL KERIGAVLQT REDIIAGVVA GLAGRLALFE NDHLDRSSLP GAGAVPWPRL
FSEPSLLYIG IPQEHLEGGK ATALLWLVKR IMDREIHRAA ARNGGTLKTL TSVYLDEFTA
FGKLPGIEDN LKTMRSRGAA FHVSVQNLAN GRSVYGRDVW ESIQGTFGQQ VYLLERLSEE
DRKWLARTLG YETVVGYSRS SSRSGFLSGS EGEGEREEAR FLLSAEEMRE VKKGETVVIL
DGKPPVRTYL GGMWEKRHPL YGLYEKARKA ARKESTPPVS QPETVTGGAA PMQDECLAVA
TGGQRAAFPS GKHLEASPLT DDPLSGRAGP VHRTDDPLSG RAGPVHREAS DPRSLEDYLR
RLTSVMPVFQ RYYHKKTTTG VRFVLPEGFP APETAWVREG WIEVRGKEEL SLNLTSRGLE
VLEKGFVAAL VRWCRVREWA RRQGLDSQAE VYMGEEEAET VLREWARRLP KEEGRVQVRV
SLEALGDEA
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