Gene Memar_2388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_2388 
Symbol 
ID4845972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp2368602 
End bp2369660 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content66% 
IMG OID640117098 
Producthypothetical protein 
Protein accessionYP_001048293 
Protein GI126180328 
COG category[S] Function unknown 
COG ID[COG5306] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGCCA TCTGGATTGT TCTCGTCGGA GGGGGCGCCG CTCTGCTCCT CGCGGCCGTT 
GCCGGGGCTG CTGCAGAGCT CCCGGACGCC GCCGTCCCCG TTACGGATAC ACCCGCGGAC
GTGACCCCGC ACTACTGGTT GGGCGGCGAT ACCCCCGGGG TCTTCACCCA CCACCGGACG
GTGTCGATCG ACAACCCCTC CGACGTCGAT GGTCTTGCGG TCCTCTTCAA CGCAACCCAC
CTTCCCGGGA TGCGGCCGGA CTTCGCCGAC ATTCGCTTTA CGGAAAGAGA CGGGACGCCT
ATCCCCTACT GGATCGAGAA CGCGAGCGCC GGCTCCCATG CCCGCATCTG GCTCGCCCTC
CCGGCGAACG CGACGGCGGT CACGATGCTT TATAGCAACC CAGAGGCCCG GGACGCCGGC
GATCCCGACG CGGTCTTCCT CTTCTTCGAG GACTACGAGA GAGGCGGCCT CTCGCGGTGG
TCGTTCTGCG GTTCGAACGC CGGGATTCAG TCCGACGTTG TCCGAGACGG TGCATACGCC
GGGGATATCA ACGTCTCCGA GCCGGATCTC CCGGAGTTTT CCAACAACCG GATATGCCTT
GCAGACATCT CCGCGGGCCC GATGGTCATC GAGGGGGACT TCCAGGTCAG CGAGTTCGGG
AGATGGTGCG GTTCGGGCTA CATCCAGGCC TGGAACGGGA CCAACCGGCT CTACGCCCTC
CACCTCCGGA ACGGCTCCGT GCAGCACTAC GACGGCGATC ACCGGAACTT CTCCGCCGAT
GCCCGGGCCG AGACCGATAC CTGGTACCAC GTCAGGGTCG TCCTGGATAC GCCGAACGCC
ACCGAACACG CCTGGATGGA CGGCGAGTAC CTGGGGAGCG CCCCCATGCG GTTCTCCGAC
GGGTCACCGG TGCCGAAGGA TACGGTCTTT GACGACTTCG CCCTGATCGG GTCTTCGGCG
TGGTACTCCG GCAATCCGCA CCACTTCTAC GCCGACAACG TCGTCGTCAG GAAGTACGAG
CCCGCCCCGC CGGTGCTCTC CTACGCGGAC GACGCATAG
 
Protein sequence
MDAIWIVLVG GGAALLLAAV AGAAAELPDA AVPVTDTPAD VTPHYWLGGD TPGVFTHHRT 
VSIDNPSDVD GLAVLFNATH LPGMRPDFAD IRFTERDGTP IPYWIENASA GSHARIWLAL
PANATAVTML YSNPEARDAG DPDAVFLFFE DYERGGLSRW SFCGSNAGIQ SDVVRDGAYA
GDINVSEPDL PEFSNNRICL ADISAGPMVI EGDFQVSEFG RWCGSGYIQA WNGTNRLYAL
HLRNGSVQHY DGDHRNFSAD ARAETDTWYH VRVVLDTPNA TEHAWMDGEY LGSAPMRFSD
GSPVPKDTVF DDFALIGSSA WYSGNPHHFY ADNVVVRKYE PAPPVLSYAD DA