Gene Memar_2242 details

Gene Information

• Locus tag: Memar_2242
• ID: 4846691
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanoculleus marisnigri JR1
• Kingdom: Archaea
• Replicon accession: NC_009051
• Strand: +
• Start bp: 2235532
• End bp: 2236098
• Gene Length: 567 bp
• Protein Length: 188 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 640116950
• Product: DNA-directed RNA polymerase subunit E'
• Protein accession: YP_001048147
• Protein GI: 126180182
• COG category: [K] Transcription
• COG ID: [COG1095] DNA-directed RNA polymerase, subunit E'
• TIGRFAM ID: [TIGR00448] DNA-directed RNA polymerase (rpoE), archaeal and eukaryotic form

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTATTATA AGATGACGCT GGAGGACAAG GTGCGCGTTC CGCCGCACCG CCTCGGGGAA 
GACCTGGAGA AGGTTATCCT CAACGTACTG CAGGAACAGC TGGAAGGCAG CATCGCAAAG 
GAGATCGGCA TCTTCATTGC GGTGACGAAT ATTCTCAACG TCGGCGAGGG GGAGTTGATC 
CCCGGAGACG GTGCCGTCTA CTACGACGTC AGGTTCGAGG CGGCGGTGCT CCGCCTGGCG 
CTCCAGGAAG TGATCGAGGG TCAGGTGGTA GAGACGACGA GTTTCGGCGC CTTCGTCAGC 
CTCGGGCCCA TCGATGCCAT GCTCCACGTG AGCCAGATAT CGGACGAATA CATCAACTAC 
GACGAGAAGA ACGGCAGGCT GGTCTGCCAG GACTCGAAGC GAGCGATCAC CGTCGGCGAC 
GGTGTCCGGG CCCGGATCGT TGCGCTCTCG CTGAACGAGC GTGAGCCGAG GGAGAGCAAG 
ATCGGCCTCA CCATGCGCCA GTCGGGTCTC GGGACCACGA CCTGGCTGGA AGAGGAACTC 
GAAGAGGAGA AGAAGGGGGC GGCATAG 

 

Protein sequence

MYYKMTLEDK VRVPPHRLGE DLEKVILNVL QEQLEGSIAK EIGIFIAVTN ILNVGEGELI 
PGDGAVYYDV RFEAAVLRLA LQEVIEGQVV ETTSFGAFVS LGPIDAMLHV SQISDEYINY 
DEKNGRLVCQ DSKRAITVGD GVRARIVALS LNEREPRESK IGLTMRQSGL GTTTWLEEEL 
EEEKKGAA