Gene Memar_2200 details

Gene Information

• Locus tag: Memar_2200
• ID: 4847384
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanoculleus marisnigri JR1
• Kingdom: Archaea
• Replicon accession: NC_009051
• Strand: +
• Start bp: 2193644
• End bp: 2194333
• Gene Length: 690 bp
• Protein Length: 229 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 640116908
• Product: ABC transporter-related protein
• Protein accession: YP_001048105
• Protein GI: 126180140
• COG category: [V] Defense mechanisms
• COG ID: [COG1136] ABC-type antimicrobial peptide transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCGTCG CGGAAAACCT CATGAGGGTC TACACGATGG GGAAGGTGGA GGTCCGCGCC 
CTTGCGGGGG TCTCGCTCGA GGTCGCAAAG GGTGAGTTTG TCGGGATCAT GGGCGCGAGC 
GGCAGCGGCA AGTCGACGCT CCTCCATATC CTCGGGCTCC TCGACCGCCC CACCTCCGGT 
GCGGTCACGA TCGACGGAAC CGACGTCCTC GCCCTCTCCG ACCACCGGCG AACCCTCTTC 
CGGCTGAACC GGCTCGGCTA CGTCTTCCAG GACTACGCGC TCATCGGGGA ACTCACCGCG 
CTCGAGAACG TCTACTTAAC GTCGCTCGTC CGGGGAGCAC CGAAAGCCGA GTACATCGAG 
CGGAGCACCG ATATCCTCCG GCGGGTCGGC CTCGGCGACC GGATGGATCA CCGGCAGAGC 
GAACTCTCGG GCGGCGAGCA GCAGCGCGTC GCGATAGCCA GGGCGCTCGT GAACAACCCG 
AGCATCCTGC TCGCCGACGA ACCCTGCGCA AACCTGGACA GCCGGACCTC GAAGAGCATC 
CTCGACCTCT TTGCGCGGTT AAACGAGGAA CTCGACCAGA CGATCGTGAT GGTCTCGCAC 
GAGGAGTGGC ACAAGGAGTA CTTCTGCCGC ATCGTCACGC TCCGGGACGG GCTGATCGGG 
GAGATGGTGG AATGCAGGAA GGAGACATAA 

 

Protein sequence

MIVAENLMRV YTMGKVEVRA LAGVSLEVAK GEFVGIMGAS GSGKSTLLHI LGLLDRPTSG 
AVTIDGTDVL ALSDHRRTLF RLNRLGYVFQ DYALIGELTA LENVYLTSLV RGAPKAEYIE 
RSTDILRRVG LGDRMDHRQS ELSGGEQQRV AIARALVNNP SILLADEPCA NLDSRTSKSI 
LDLFARLNEE LDQTIVMVSH EEWHKEYFCR IVTLRDGLIG EMVECRKET