| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_2182 |
|---|
| Symbol | |
|---|
| ID | 4847373 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | + |
|---|
| Start bp | 2177362 |
|---|
| End bp | 2178762 |
|---|
| Gene Length | 1401 bp |
|---|
| Protein Length | 466 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640116890 |
|---|
| Product | multi-sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_001048087 |
|---|
| Protein GI | 126180122 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCACTCC TCGCAATATC GGTCTTCCTG ACCTACTACT TCCACGCCAT CCTGATGCTC
GGGACCGTCT TTTCGCACTT CTTCTACATC CCGATCATCC TGACCGCGCT CTGGTGGGAG
AAACGGAGCA TACTGGTCGC CATCTTTCTC GGCGGGCTCG TCGTCATCAG CAGCCTCCTT
TATCGACCCG AACTCCTGAC CCTGAACGAC TACGGGCGCG CGCTGATGTT CGTCGTCATC
GCTTTCGTCG TCGCGTCCCT CTCCGAGCAG CTCAAAGGGC GGGAGCAGGA GGTGAAGAGA
CAGAGGGATC TCGTGCAGCG TTACCTGGAC GTGGCGGGCG TCCTCTTCGT CGTCATCGGC
ACCGACCATA CCATCCGGCT CGTCAACCGC CACGGGTGCG AGGTGCTCGG CTACCGGGAA
GAGGAACTGC TCGGGAAAGA CTGGTTCGAT ACGGTTGTTC CCGGAGCGTT CCGGGAGGTG
CGACGGCAGA CCTTTAATGA GATGATTGCC CGGAAAACCA GCATTCCAGG GCAGCGGGAG
CACCCTGTCG TCACGCGGAG CGGCGACGAA CTGATCCTCG CGTGGCAGGA CACCGTGCTT
ACCGGAGACG ACGGTCAGCC GATCGGGATA ATCGGGTCGG GAGCCGACAT CACCGATCGT
ATCCGGGCCG AAGAGGAGAT GCGGAAGGCC CATGACGAGG CAAACCTCTA CCTCGACATC
ATGACGCACG ACATCAACAA CGCGAACGGC GTCGCTCTCG GGTATGCCGA CCTGCTCGAG
GCGATGCTCG ACGGGGGGGG CCAGGAGATG GTCCGAAAAC TCAGGGCCGG CGTCGGCCGG
AGCATCGAGA TCATCCAGAA CGTCACGACG ATAAGAAGGC TACATTCCCA TGAGACAGCG
ACGAAGCCCG TCGACCTCGA CGCTGTCGTC AGGGCCGAGA TTGCCCACCA TCCTGGTGCC
CGGATCGCCT ACAGCGGAGA GACAGTCAGG GTCATGGCCG ACGACCTTCT CTCCGAAGTC
TTTGCCAATC TCATCGGCAA CAGCATCAAG TTCGGGGATC CGGGAGTCGA GATCGCCGTC
AGGGTCGAGG AGAGCGGCGA TAAGGTTCTG GTCTCGATCG AGGATACCGG GCCGGGAGTA
TCCGACGCGG TCAAACCAAC CCTCTTCACC CGTTTTGCGC GGGGGACGAG CAGCAGGAGC
GGAAAAGGGC TCGGCCTCTA CATCACCCGC ACCCTGGTCG AACGCTACGG CGGTCGGGTA
TGGGTCGACG ACCGGGTTCC GGGGCGTCCC GGACGCGGCG CGGCGTTCCG GTTCATCCTC
CCCCGGTCGA GCCGGGCTCG GGAGCCGCCG GCCTCTCCCG CGCCGCCGGC GGCCTGCCGG
ATAGTCACCG CCAGACCTTG A
|
|---|
| Protein sequence | MALLAISVFL TYYFHAILML GTVFSHFFYI PIILTALWWE KRSILVAIFL GGLVVISSLL
YRPELLTLND YGRALMFVVI AFVVASLSEQ LKGREQEVKR QRDLVQRYLD VAGVLFVVIG
TDHTIRLVNR HGCEVLGYRE EELLGKDWFD TVVPGAFREV RRQTFNEMIA RKTSIPGQRE
HPVVTRSGDE LILAWQDTVL TGDDGQPIGI IGSGADITDR IRAEEEMRKA HDEANLYLDI
MTHDINNANG VALGYADLLE AMLDGGGQEM VRKLRAGVGR SIEIIQNVTT IRRLHSHETA
TKPVDLDAVV RAEIAHHPGA RIAYSGETVR VMADDLLSEV FANLIGNSIK FGDPGVEIAV
RVEESGDKVL VSIEDTGPGV SDAVKPTLFT RFARGTSSRS GKGLGLYITR TLVERYGGRV
WVDDRVPGRP GRGAAFRFIL PRSSRAREPP ASPAPPAACR IVTARP
|
|---|
| |