Gene Memar_2179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_2179 
Symbol 
ID4847376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand- 
Start bp2173954 
End bp2174547 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content65% 
IMG OID640116887 
Producthypothetical protein 
Protein accessionYP_001048084 
Protein GI126180119 
COG category 
COG ID 
TIGRFAM ID[TIGR02777] DNA ligase D, 3'-phosphoesterase domain 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.930875 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGGCC CTGACATGCT TGATGAGTAC CACGAGAAGA GGGATTTCTC CCGGACGCCG 
GAGCCGCCGG GGGAACGGGA GGTTTCCTCC CGTCCCATCT TCGTCATCCA GAAACACGCA 
GCGACCACGC TCCACTACGA TTTCCGCCTG GAGGTCGACG GGGTGCTGAA GTCCTGGGCG 
GTTCCGAAAG GGCCGTCAAT GAGCCCGAAG GAGAAGCGCC TCGCCGTGCC GACGGAGGAT 
CATCCGCTCG AGTACGCCGA CTTCGAGGGC GTCATTCCGG AGGGGAGTTA CGGTGCGGGA 
ACGGTTCTCG TCTGGGACCG TGGGACCTAC CAGAACCTCA CGGGGAGGAA GGGGGAGAGG 
ATCGAGGTCG CTGAGGCCGT GAGGAGGGGC CACGTCTCTT TCCTGCTCGA TGGGGAGAAG 
ATCCGGGGTG GGTACGCTCT CACCCGTTTC AGGACCGGGA AAGGGGAGGC CTGGCTCCTC 
GTGAAGATGG ACGATGCCGA GGCCGACCCC GGCAGAAACC CGGTCGCGAC GGAGCCCCGA 
TCGGTCGTCT CCGGGCGAAC GATCGAGGAG ATCGGAGCGG GGAGGAAGGA GTGA
 
Protein sequence
MAGPDMLDEY HEKRDFSRTP EPPGEREVSS RPIFVIQKHA ATTLHYDFRL EVDGVLKSWA 
VPKGPSMSPK EKRLAVPTED HPLEYADFEG VIPEGSYGAG TVLVWDRGTY QNLTGRKGER 
IEVAEAVRRG HVSFLLDGEK IRGGYALTRF RTGKGEAWLL VKMDDAEADP GRNPVATEPR 
SVVSGRTIEE IGAGRKE