| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_2059 |
|---|
| Symbol | |
|---|
| ID | 4846397 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | - |
|---|
| Start bp | 2050292 |
|---|
| End bp | 2051233 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640116768 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001047967 |
|---|
| Protein GI | 126180002 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4052] Uncharacterized protein related to methyl coenzyme M reductase subunit C |
|---|
| TIGRFAM ID | [TIGR03274] putative methanogenesis marker protein 7 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.427395 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGACGC TGGTGCCGGT GACCTACAAG GGAGGCGTCT ACCGGCACGA CGAGATCATG
GATCTGATCG ACGACCTCGG GGGCTACATC GTCCAGAAGC ACGTCATGGC CCAGGACGTC
GTGCTCCAGT CGTTCGTGCC GCGAGACGAT ATCGAGATGA TACGCCGGAT CGCAAAACCG
CTCGCCGGCG AGGTGGTCGA GGCCCCTCTC GTCGGGACCG AGATTGCCGT CGTGAGCCCG
AGCCTGGAGA TCCATCACCT TCCCCACATC TCCTGCGATA TCGCCGAGTA TCTCAGGCGG
TCGGGCGCGA AGACCAACAT GGTCGGGCTT GCGAGAGGAT TCGGGAAACG GATTGCGAAT
TTGAACGACG AGGAGCGGGA CGTCATCAAC GAGCACGATC TCGCCGTCTA CGCGCTCGGC
AACTTCGAAG AGTGTATCCG GCAGAAGTTC CCGGCGATCC GCCGGGAGAT CCACGTGCCG
ATCGTGGTGA CCGGCGCGCC CGACCGCGAA ACCCTGATGC GGGCGATCGA CCCACCCGTC
GAAGGATACG TAGGCGGGAT CGGCAGGATC ATGCACCGGT TCAAGCGCCC CGAGGAACTC
GGGAAACTCG ACGAACTGGT GGACGAGATC TCCCGCGTCC TGGATGCGCG GCGGGATGCT
CTCGCAAAAG ACCCGCTCTC CGTCTTCCCG CCCCGCCTGA TGGCGATCAT CGAGGAGCAG
ATCCACGAGG TCAGCCTGCT GACGCACCCG ACGCCGGTGA CCGCCCAGAT GGAGGGGCTC
CGGGTGAAAC TCCCCTACGA TTCGTACGCC GACGACGTGC GGTCGCTCGA GGTCGCCGAA
GGGGTGACGG TCGGTGATAT CGCCGACGTT ACGCCGTCAC GGATGCGCAA CTACATATTG
ATCCGGATTA AACCTTTCTC GGAAACGAGG ATACTGGTGT AG
|
|---|
| Protein sequence | MTTLVPVTYK GGVYRHDEIM DLIDDLGGYI VQKHVMAQDV VLQSFVPRDD IEMIRRIAKP
LAGEVVEAPL VGTEIAVVSP SLEIHHLPHI SCDIAEYLRR SGAKTNMVGL ARGFGKRIAN
LNDEERDVIN EHDLAVYALG NFEECIRQKF PAIRREIHVP IVVTGAPDRE TLMRAIDPPV
EGYVGGIGRI MHRFKRPEEL GKLDELVDEI SRVLDARRDA LAKDPLSVFP PRLMAIIEEQ
IHEVSLLTHP TPVTAQMEGL RVKLPYDSYA DDVRSLEVAE GVTVGDIADV TPSRMRNYIL
IRIKPFSETR ILV
|
|---|
| |