| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1993 |
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| Symbol | |
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| ID | 4846602 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | - |
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| Start bp | 1980486 |
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| End bp | 1981664 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640116699 |
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| Product | nucleotidyl transferase |
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| Protein accession | YP_001047901 |
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| Protein GI | 126179936 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
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| TIGRFAM ID | [TIGR01208] glucose-1-phosphate thymidylylransferase, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.772939 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGTGT GCATTATGTG CGGAGGGGAG GGCACACGGC TCCGCCCCCT CACATTCGGG
CGTCCTAAAC CGTGCATCCC GATAGTCAAC AAACCCTCGA TCCAGCACCT GGTCTCACAC
CTCGCGAACC TCGGGTTTAA CGACGTGGTG ATCACGCTCG GTTACATGAG CGAGTCCATC
GAGGCGGCCC TCGGGGACGG CTCCCTCTTC GGGGTCAACG TCACCTACGT CCACGAGAAG
ACGAAACTCG GAACGGCGGG GAGCGTCAAG AACGCCCAGA AATACCTTGA AGAGCAGCCG
TTCCTGGTCG TCGGCGGCGA TCACGTAGTG GGCCTGAACC TGCTTGAATT TTACCGCGAG
CACCTTGGCA ACGACTCGAT CACCACGATA GGGCTCATCA GCATCGACGA TCCCACCGAG
TACGGGATCG CCGAGATCGA CGCCGATTAC CAGATCAAGA GGTTCAAGGA GAAGCCGAGC
CCGGGGGAGA TCTTCTCGAA CCTGGCGAGT ACCGGTATGT ACGTCTGCGA CCCGGAGATC
TTCGACCATA TCCCGACCGG CGAGAAGTTC GACTTCGCCC GCAACCTCTT CCCCGAACTG
ATGGAGCAGG GTTACCCCCT TAAAGCCTGG CTTGCCCGCG GCAACTGGTC GGACGTGGGA
AGCCCGAGGT CGCTTCGCGA AGCCGAGCGG TGGAAATTGC AGGATATCGG GTTCACGAAC
ATCTCCGGCG ACCTCTATAT CAAAGGCGCC CGGATCCTCG GCCCGGTGCA GATAGGGAGC
TCGGTCTCGG TTGCGGCGAA CTCCCGGGTG ATCGGGCCGG TCTCGATCGG CGCCGGGACG
ATCATCGAGG AGAACGTCGT CATCGGACCG TACACGAGCA TCGGAGAAGG CTGTATCATC
AAGAACAGCG CAAAGATCTT CTCCTCGTCC ATCTACAACC GGGTGGTGAT CGGGAGCGAC
AGCACTGTCA GCGGGAGCAT CATCGACAAC GATACGCTCG TCGGCAGCGG GTGCAACATC
GAGCACGACA CGGTCATCGG GCCGCGTGCG GTGCTGAAAG GCGGTGTGGT CGTCCACTCC
GGGACCCGGC TCTGGCCGGA GGTGATCATC CCGGAAGGGA CGGTCGTCAA AGAGCACGTC
TTGAACGAGG ACTACGATAC CCGGACCGAA GGGTCTTAG
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| Protein sequence | MKVCIMCGGE GTRLRPLTFG RPKPCIPIVN KPSIQHLVSH LANLGFNDVV ITLGYMSESI
EAALGDGSLF GVNVTYVHEK TKLGTAGSVK NAQKYLEEQP FLVVGGDHVV GLNLLEFYRE
HLGNDSITTI GLISIDDPTE YGIAEIDADY QIKRFKEKPS PGEIFSNLAS TGMYVCDPEI
FDHIPTGEKF DFARNLFPEL MEQGYPLKAW LARGNWSDVG SPRSLREAER WKLQDIGFTN
ISGDLYIKGA RILGPVQIGS SVSVAANSRV IGPVSIGAGT IIEENVVIGP YTSIGEGCII
KNSAKIFSSS IYNRVVIGSD STVSGSIIDN DTLVGSGCNI EHDTVIGPRA VLKGGVVVHS
GTRLWPEVII PEGTVVKEHV LNEDYDTRTE GS
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