Gene Memar_1966 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_1966 
Symbol 
ID4847712 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp1960574 
End bp1961023 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content65% 
IMG OID640116672 
Productprefoldin, alpha subunit 
Protein accessionYP_001047874 
Protein GI126179909 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1730] Predicted prefoldin, molecular chaperone implicated in de novo protein folding 
TIGRFAM ID[TIGR00293] prefoldin, archaeal alpha subunit/eukaryotic subunit 5 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGACCAGG CAGATCCTCG CGAGATACAG ACCCTCCAGA TGTACCTGAA CGAATACGGG 
CAGCAGATAG AACTCATGAC GCAGCAGCTC TCGATGATCG AGCAGCAGCG GCTTGAGGGC
ACCGCCGCCA TCGAGACGCT CCGCGCTCTC CAGGAGAACG CGGACGGTGC CGTCCTTCTC
CCCATCGGCG GAGGCGCGTA CCTCCGGGTG AAGGTGCTCG ATGCCGGCCA CGTTCTCGTG
AACATCGGGG CGGACGTCTC CGTCGAGAGG GCCACCGCGG ATGCGGTGGG GTATCTGGAG
GATCGGATAA CCGAACTTGA GGCGCTCGCG AAGAAGGTCG CGGGTTCGGT CGAACAACTG
CAGGGCCAGG CAACGGAGAT CTCCCGGCGC CTCGAGGCGG CGTATCGGGG AGCCCGGCAG
GCTCAGGCAG GCCAGGGCGG AAGTTCATAA
 
Protein sequence
MDQADPREIQ TLQMYLNEYG QQIELMTQQL SMIEQQRLEG TAAIETLRAL QENADGAVLL 
PIGGGAYLRV KVLDAGHVLV NIGADVSVER ATADAVGYLE DRITELEALA KKVAGSVEQL
QGQATEISRR LEAAYRGARQ AQAGQGGSS