Gene Memar_1960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_1960 
Symbol 
ID4847604 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp1955707 
End bp1956057 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content55% 
IMG OID640116666 
ProductRNA polymerase Rpb4 
Protein accessionYP_001047868 
Protein GI126179903 
COG category[S] Function unknown 
COG ID[COG1460] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGTAA AACGAATTGT AAGCGAAGAG CGGATGCTGC TTCCCGAACT GCGGGACACT 
CTCCTATCGG TGGAGGCAGC CCGGCTCGAA TCCGAAGAGG AGATGTCCTA CGAGCTTCGT
AAGAGCATCG AGCATGCCAA CCAGCTTTCA AAGACATCTT CCGAGAAGGC TCGCGCCCTC
GTCGACGAGC TTGTAAAGCT CGAGAAGATG AAAGAGGAGA TCGCCTACCG CATCGCGAAC
CTGATGCCGC GGACCCGGGA CGAACTGCGG GCCATCTATG CCAAAGAACG GTTCAATCTT
ACAACGGAAG AGCTGGACGA GATCCTCGAC CTGGTAATGA CCCACTTCTG A
 
Protein sequence
MKVKRIVSEE RMLLPELRDT LLSVEAARLE SEEEMSYELR KSIEHANQLS KTSSEKARAL 
VDELVKLEKM KEEIAYRIAN LMPRTRDELR AIYAKERFNL TTEELDEILD LVMTHF