Gene Memar_1885 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_1885 
Symbol 
ID4846132 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp1882038 
End bp1882541 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content61% 
IMG OID640116591 
Producthypothetical protein 
Protein accessionYP_001047793 
Protein GI126179828 
COG category[S] Function unknown 
COG ID[COG1720] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00104] probable methyltransferase, YaeB/AF_0241 family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGTCA CCTACCGAAT CATCGGAACC ATTCACTCAC CGTTCACCGA CCAGGACACA 
ACGCCCATCC AGAGCATCTT CTCCGAAGAG GAGGGGACGA TCGAGGTCTT TCCCGAGTAC
GCCGACGGGC TGGAGGGGGT CGAGGGGTTC TCCCACATCA TCCTCCTCTA CCACTTCCAC
CAGGCGAACG GCTTTAGCCT GCGCCAGCGC CCGTTCGTCG ACGGCAGCAA AGAGCGCGGG
ATCTTTGCCA TACGCCATTT CAGCCGCCCG AACCCGATCG GGATCTCCCT CGTCGAGGTC
GTCTCCGTCG AAGGCAACAC CGTCCGGGTC CGCGGGATCG ACGTGCTGGA CGGCACGCCG
CTCCTCGACA TCAAACCCTA CGTCCGCCAG TTCGATCACC GCGACGACGT CAGGAGCGGC
TGGGTCGACG CAAAGCACAT CGAGGAGGTG AAACTCAAGA GTTTCTCGCC AAAGGATCTC
CGGGAGCATG AGGAGTCTTC ATGA
 
Protein sequence
MEVTYRIIGT IHSPFTDQDT TPIQSIFSEE EGTIEVFPEY ADGLEGVEGF SHIILLYHFH 
QANGFSLRQR PFVDGSKERG IFAIRHFSRP NPIGISLVEV VSVEGNTVRV RGIDVLDGTP
LLDIKPYVRQ FDHRDDVRSG WVDAKHIEEV KLKSFSPKDL REHEESS