| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1876 |
|---|
| Symbol | hisD |
|---|
| ID | 4848400 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | - |
|---|
| Start bp | 1872186 |
|---|
| End bp | 1873436 |
|---|
| Gene Length | 1251 bp |
|---|
| Protein Length | 416 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640116582 |
|---|
| Product | histidinol dehydrogenase |
|---|
| Protein accession | YP_001047784 |
|---|
| Protein GI | 126179819 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0141] Histidinol dehydrogenase |
|---|
| TIGRFAM ID | [TIGR00069] histidinol dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.963985 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGGCAGG CGCTGGATAT CGAGACCTGG ATCGCCGGGC GGCGGTCGGA CATCGACCGG
GTGAAGGGAC CGGTCTCGGA GATCATCGGG AGGGTGCGAG AGGAGGGCGA CGCCGCCCTG
CTCGACCTGA CGAAGAGGTT CGATAAGATC GATCTCGAGG AGATCGCCGT CCCCGACGAG
GAGCGGGAGG CGGCCTACGA TGAGGTGGAC GCACGGCTGG TCGAAAGTCT CGTGGAGGCG
GAGGAGCGGA TCAGCCGGTT CCACGAACTG CAGCGCGGAC GCGACCTCTG GCTGCAGGAG
ATGGAGCCCG GGATCACCCT CGGCGTCAAG ACGACTCCGC TCTCCCGTAT CGGCGCCTAC
GTCCCCGGCG GGCGGGCGGC CTACCCCTCG ACGGCGCTGA TGTGCACGAT CCCGGCGAAG
GTCGCGGGGG TCGCGGAGAT CTGCTGCTGC ACCCCGCCGC CGACGAGCCC GATCACCCTC
GTCGCGCTCG ATATCGCCGG GGTCGACGAG GTCTACCGGG TCGGCGGCGC CCAGGCGATC
GCGGCAATGG CGCTCGGGAC GGAGTCGGTC CCACGGGTGG AGAAGATCGT CGGCCCGGGG
AACGTCTACG TCACCGCCGC GAAGATGCTT CTGCGCGACG AGGCTGAGAT AGACTTCCCG
GCAGGACCGA GCGAGATTGC GATCCTCGCT GACGGCACGG CGAACCCGAC CTTCATCGCG
GCCGATATCC TTGCCCAGGC CGAGCACGAC CCGAACGCCG CCTGCGTCCT GGTGACCACC
GACGCGGCCC TCGCCGGTGC AGTCGGTGCC GAGGTGAAGC GGATGGCCGG GGAGGCGAAA
CGCCGCGATA TCGTCGCAAA GGCGCTCGAG CACTCCGGCT ACATCGTTGC CGGCGATCTC
GACGAAGCGG TCGCGACCGT CGACGGCATC GCCCCCGAGC ACCTCTCGGT CCAGATGGCC
GACCCGCTCG CCGTCATCAA CCGCATCCGG AGCGCCGGGT CGATATTCGT CGGCCCCTAC
GCGGCGGTAG CCTGCGGCGA CTATGCCTCG GGGACGAACC ACGTCCTCCC GACGGCTGGC
TACGCTCGGC TCTACTCCGG CCTCGACGTG AACCACTTCT GCCGGCGCTC GACGGTGCAG
GTGATCACGC GGGAGGGGCT TGAGGCCATC GGCGACGTTG TGGAGACGAT CGCCGACGCG
GAGGGGCTCC ACGCCCACGC GGAGTCGGTA CGGGTGCGGA GAAGGGGATA A
|
|---|
| Protein sequence | MWQALDIETW IAGRRSDIDR VKGPVSEIIG RVREEGDAAL LDLTKRFDKI DLEEIAVPDE
EREAAYDEVD ARLVESLVEA EERISRFHEL QRGRDLWLQE MEPGITLGVK TTPLSRIGAY
VPGGRAAYPS TALMCTIPAK VAGVAEICCC TPPPTSPITL VALDIAGVDE VYRVGGAQAI
AAMALGTESV PRVEKIVGPG NVYVTAAKML LRDEAEIDFP AGPSEIAILA DGTANPTFIA
ADILAQAEHD PNAACVLVTT DAALAGAVGA EVKRMAGEAK RRDIVAKALE HSGYIVAGDL
DEAVATVDGI APEHLSVQMA DPLAVINRIR SAGSIFVGPY AAVACGDYAS GTNHVLPTAG
YARLYSGLDV NHFCRRSTVQ VITREGLEAI GDVVETIADA EGLHAHAESV RVRRRG
|
|---|
| |