Gene Memar_1785 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_1785 
Symbol 
ID4847003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand- 
Start bp1778791 
End bp1779423 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content64% 
IMG OID640116483 
ProductFeoA family protein 
Protein accessionYP_001047693 
Protein GI126179728 
COG category[K] Transcription 
COG ID[COG1321] Mn-dependent transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTCCTT CCACGTTTGA GGATTACCTC GAAGCGATCC TCACGATCAC GGAAAACGGC 
GGGCAGTCGG CGACGCTGGA CGAGATAACG GCAGCCCTCG ATACCGGGAA GGAGGCCGCC 
GGGACGACCG TCGCCGCTCT GGTCGAGGAA GGATACCTGG AGCGGGCGGA CGGAGACGCT 
GTCAGGCTTA CCGGGAAGGG TGCGTCGGTG GCGTCGGTGG TGGCGCGGAA ACACCGCGTT 
CTCCAGTGTT TTTTGACGGA GATGCTCGGC GTCGATGAGG ACGCGGCAAG CAGGGAGGCC 
TGCACGCTCG AGCACGGGAT ATCCGACGAG ACCATCGAGC GGCTCTCCTC CTACATGGAC 
GGCGCCCAGT CCCCGCCGGG ACGTATGGGA CGTTGCCGGG GGCACGATGT CTGCACGCTG 
CTCGACTGCA AGGAAGGCGA TACTGTCCGG GTGGCGATGA TGCGCGGTCA TCGGCGGCAC 
CGGAGGCTGC TCGACCTCGG CATCTTCCCC GGCGAGATCG TGCAGATCCG GCGCAAGCTC 
CCGAACGAGT CGGTCGTCGT CAGGGTGAAA GGCTGCGATA TTGCCATCAG CCCCGAGATC 
GCGAGATCAA TCGTCGTGGA GTCGTGTCCA TGA
 
Protein sequence
MLPSTFEDYL EAILTITENG GQSATLDEIT AALDTGKEAA GTTVAALVEE GYLERADGDA 
VRLTGKGASV ASVVARKHRV LQCFLTEMLG VDEDAASREA CTLEHGISDE TIERLSSYMD 
GAQSPPGRMG RCRGHDVCTL LDCKEGDTVR VAMMRGHRRH RRLLDLGIFP GEIVQIRRKL 
PNESVVVRVK GCDIAISPEI ARSIVVESCP