| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1689 |
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| Symbol | pyrB |
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| ID | 4847953 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | + |
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| Start bp | 1687329 |
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| End bp | 1688225 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640116385 |
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| Product | aspartate carbamoyltransferase catalytic subunit |
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| Protein accession | YP_001047598 |
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| Protein GI | 126179633 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0540] Aspartate carbamoyltransferase, catalytic chain |
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| TIGRFAM ID | [TIGR00670] aspartate carbamoyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.417019 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACCACA TTATCTCGAT CCGCGATTTT GAAAGGAGCG ATCTCGATTA CCTGCTTGAC
CGGGCGCAGG AGTTCGATAC CGGCAAGTAC CGGCCCGGAA TGCTTGACGA CAAACTCGTG
GCGCTTCTCT TCTTCGAGCC CAGCACCAGG ACAAGGATGT CGTTTGCGAC GGCCATGGCC
CGGCTCGGCG GACGGTCGAT CAGCGTCGAT TCCGTGGAGG CGAGTTCCAT CGTCAAGGGA
GAGACGCTCG CGGACACCAT CCGGGTGGTG AGCGGCTACG CGGACGCCAT CGTGCTCCGC
CACCCGAAGG AGGGGGCGGC ACGGCTCGCA AGCGAGTTCG CCACGGTGCC GGTCATCAAC
GCCGGCGACG GCGCGGGGCA GCACCCGAGC CAGACGCTGC TCGACCTCTA CACCATCAGG
CAGTCGATGC CGGTCGATGG GATCGACGTC GGACTTTTGG GGGATCTCCG CTACGGCAGG
ACTGCGCACT CGCTGGCGCT CGCCCTCTCC CTCTACGGCG TCACGCTGCA TACCATCGCG
CCCGTGGGGC TCGAGATGCC GGCAAACATC GCCCTCGAAC TCAGGGAGCG CGGCATGGAG
GTCGTCGAGC ACCCGAACGT CGAGGAGGCG ATCCGGGAAC TCGACGTCCT CTACGTGACG
AGAATCCAGC GCGAACGGTT CCCGGACTCG GCATCCTACT ACAACGTCGC GTCCAGTTAC
CGGATCACGA CCGACCTTCT CGACGGCGTG AAGGAGCGGC TGATGATCCT CCACCCGCTC
CCGCGCGCAG GTGAGATCGA CCCCGCGGTG GACCGCACGC CGTACGCGCG CTACTTCGAG
CAGGCGAGGA ACGGCGTGCC CATCAGGATG GCGCTCCTCC ACGAGGTGAT GAAATGA
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| Protein sequence | MYHIISIRDF ERSDLDYLLD RAQEFDTGKY RPGMLDDKLV ALLFFEPSTR TRMSFATAMA
RLGGRSISVD SVEASSIVKG ETLADTIRVV SGYADAIVLR HPKEGAARLA SEFATVPVIN
AGDGAGQHPS QTLLDLYTIR QSMPVDGIDV GLLGDLRYGR TAHSLALALS LYGVTLHTIA
PVGLEMPANI ALELRERGME VVEHPNVEEA IRELDVLYVT RIQRERFPDS ASYYNVASSY
RITTDLLDGV KERLMILHPL PRAGEIDPAV DRTPYARYFE QARNGVPIRM ALLHEVMK
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