Gene Memar_1646 details

Gene Information

• Locus tag: Memar_1646
• ID: 4847359
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanoculleus marisnigri JR1
• Kingdom: Archaea
• Replicon accession: NC_009051
• Strand: -
• Start bp: 1655015
• End bp: 1655686
• Gene Length: 672 bp
• Protein Length: 223 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 640116340
• Product: ABC transporter-related protein
• Protein accession: YP_001047555
• Protein GI: 126179590
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG1122] ABC-type cobalt transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCCGTA TCGCCGATCT CCGGCACCGG CTGCTCGACA TCCCCGGCCT TGCGGTGGAC 
GCGCGCCATA TCGCCGTTAT CGGGCCGAAC GGGAGCGGCA AGACGACGTT GCTCTCGGTC 
TGCTCCGGGA TCGAGGAGCC CGAAGCAGGA TCTGTCCTGC TCCTCGACCG TCCGCCGTCG 
GCCGTGAAGG TCGGGTGGGT GGGGGAGTTC CCCGACCGGA CGCTCCTCTT CTCCCGGGTC 
TACGACGAGA TCGCATCGAC GCCCCGGTTC CGCCACCGCC CCTGCCCCGA GACGGACAGG 
GCGGTCCGGG CGGTTGCGGA GGTTGTCGGC ATCCGCCACC TCCTCGGCAA GAAGGTCGCG 
GCCCTCTCCG GGGGGGAGAA GGCGCTCGTT GCGCTGGCCG CCGCCTGCGC CGGCGACCCC 
GAGGTGCTCG TCCTGGACGA GGCTGATTCG CACCTGGACG GCGTGACCGC GGAGCGCGTC 
CAGCGCGTGG TGCGGGAGAG CGCCGCAGCC CACGTGCTCT GGTGCACGCA GTCGATGGAC 
GTTGCGGCTA CCGCGGACTG CGTTCTCTTT ATGGAGAACG GCCGCGTCAG GCACCACGGC 
ACGCCGGAGG AGGTCTTCTC CGCGCTCGAG GAGACGTGCT TTTACCCCAC GCTCTGGAGG 
GTGTCCCGGT GA 

 

Protein sequence

MIRIADLRHR LLDIPGLAVD ARHIAVIGPN GSGKTTLLSV CSGIEEPEAG SVLLLDRPPS 
AVKVGWVGEF PDRTLLFSRV YDEIASTPRF RHRPCPETDR AVRAVAEVVG IRHLLGKKVA 
ALSGGEKALV ALAAACAGDP EVLVLDEADS HLDGVTAERV QRVVRESAAA HVLWCTQSMD 
VAATADCVLF MENGRVRHHG TPEEVFSALE ETCFYPTLWR VSR