Gene Memar_1611 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_1611 
Symbol 
ID4848435 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand- 
Start bp1616779 
End bp1617366 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content58% 
IMG OID640116304 
Producthypothetical protein 
Protein accessionYP_001047522 
Protein GI126179557 
COG category[S] Function unknown 
COG ID[COG4749] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0567857 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTCT TCTATATTTT TTACAATCAG GAGCGCTGGG ACAACTGGAT CAAGACGTTG 
CAGGAAGCAA GTTTTGAGCC CGCCGAAGGC GAAGAGGTCT CGGAAGGCGA GCAGATGCTC 
TTCAGTTTCA CCGAAGACAT CACCCTCTCG GTCTTAAAGA TCATCCGCCT CTACCAGAAC 
GGCCGGTTCA CGAAGGAGGA GGCTACGGAG AAACTCGACG ACGTGGAGAT TATCGTCATG 
ACCGGGCTTC CCGAGGGGGA ACTCGAGGAT ATCATCGGGT CGATCCAGCT CTCGCTGCTG 
GTGCTCTTCA CCGCCTGCCG GAAGTATCTC GAGGGCGGGT TTGAGACGGA CATCAAGACC 
CTCGTGAAGA AGGGCAAGGG TATCGACGAG GAGAATCTCG AGGAGGCGCT CGAGGTTGCG 
GCGAATATCG GGGCCGCCGT GGTCGACGGC GCCACCTGCT GCGCGAAGTA CATCAAGGAC 
AACGTGGAGA ACCCGGGCCT CTTCGACGAG TGGCTCATCG AGATCGAGAC CATGAGCAAC 
GCCATGAAGT CGCTCGCGAA GTTCGACGAG GAGCCCGGCG AGTCGTGA
 
Protein sequence
MKLFYIFYNQ ERWDNWIKTL QEASFEPAEG EEVSEGEQML FSFTEDITLS VLKIIRLYQN 
GRFTKEEATE KLDDVEIIVM TGLPEGELED IIGSIQLSLL VLFTACRKYL EGGFETDIKT 
LVKKGKGIDE ENLEEALEVA ANIGAAVVDG ATCCAKYIKD NVENPGLFDE WLIEIETMSN 
AMKSLAKFDE EPGES