Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_1587 |
Symbol | |
ID | 4847682 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | + |
Start bp | 1592244 |
End bp | 1593332 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640116280 |
Product | DNA topoisomerase VI subunit A |
Protein accession | YP_001047498 |
Protein GI | 126179533 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1697] DNA topoisomerase VI, subunit A |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCTAGGG AAGAGATGGA TGCGCTGGCA AAGGAGCGGC TCGTCGGTAT CGCCCGCACC TGGTACGACC AGATGCGGGA CGGCATCGTG CCGTTCATCC GGCTGCCGAC GCGGACGAAG CGGAATATTG AGTACGACGA TGCGAGCGAG GTCTGGAAAT ACGGCGAGCG GGAGAGCACC CGGGCGGCGA CGAACGAAAA AGGGGCGGTC CACCTCCTGA AGATGGCCTA CCTCATCGGG TTTTTGAAGC AGCAACTCGT GGAGAACCGG TCGTCGACCC TGAGAGAGTT GTATTACATC TCGGAAGGCT GGAAGAAGGC GAAGTTCGGT GCTCAGGACG AGAGCAACCA TCTCATCGAA GACCTCGAGA TCATCACCGA GGTGCAGCGG GAGGCGTTTC ACCTCCGGCC GGAGGAGGAC GGGGCCTCGG TCTTCGGGCC GCTGCGGATC CGGGAGACCA CCCGCCGGGG CGTCAAGGAG ATGCACTGCC AGGAGGACGT CGGGGAGGCG GGCTACCCCA TCCCAAACAA CGTCGACAAC CTCGAATTCG TCGACCACGA CGCGAAGTTC GTCATCGCCA TCGAGACCGG CGGTATGTAC GCCCGTCTTA TGGAGAACGG GTTCGACGAG GAGTACGGGG CGGTTCTGGT CCACCTCAAG GGGCAGCCGG CGCGCTCGAC GCGGAGAGTC CTGCGGAAAC TCAACGACTC GCTCGGTCTC CCCGTCGTGG TCTTCACCGA CGGCGATCCC TGGTCCTACC GGATCTACGC GAGCGTCGCC TACGGTTCGA TCAAGAGCGC GCATATGTCG GAACTTCTCG CGACCCCCCA GGCGCAGTTC ATCGGCGTGC AGCCTTCCGA CATCTCCGAC TACAACCTCC CCGCCGACAA ACTCACCGAG CAGGACGTCA GCGCCTTAAA AGCGGAACTG ACCGACCCGA GGTTCGCGAC CGACTACTGG CGGAGCCAGA TCAACCTGCA GCTCGAGATG AAGCTGAAGT CGGAACAGCA GGCGTTCGCG AGCAGGGGGC TCGACTTCGT GACGAAGGAG TACCTCCCGA CGCGGTTGTC GGAGATGGGG ATCATTTGA
|
Protein sequence | MSREEMDALA KERLVGIART WYDQMRDGIV PFIRLPTRTK RNIEYDDASE VWKYGEREST RAATNEKGAV HLLKMAYLIG FLKQQLVENR SSTLRELYYI SEGWKKAKFG AQDESNHLIE DLEIITEVQR EAFHLRPEED GASVFGPLRI RETTRRGVKE MHCQEDVGEA GYPIPNNVDN LEFVDHDAKF VIAIETGGMY ARLMENGFDE EYGAVLVHLK GQPARSTRRV LRKLNDSLGL PVVVFTDGDP WSYRIYASVA YGSIKSAHMS ELLATPQAQF IGVQPSDISD YNLPADKLTE QDVSALKAEL TDPRFATDYW RSQINLQLEM KLKSEQQAFA SRGLDFVTKE YLPTRLSEMG II
|
| |