Gene Memar_1587 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_1587 
Symbol 
ID4847682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp1592244 
End bp1593332 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content62% 
IMG OID640116280 
ProductDNA topoisomerase VI subunit A 
Protein accessionYP_001047498 
Protein GI126179533 
COG category[L] Replication, recombination and repair 
COG ID[COG1697] DNA topoisomerase VI, subunit A 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTAGGG AAGAGATGGA TGCGCTGGCA AAGGAGCGGC TCGTCGGTAT CGCCCGCACC 
TGGTACGACC AGATGCGGGA CGGCATCGTG CCGTTCATCC GGCTGCCGAC GCGGACGAAG
CGGAATATTG AGTACGACGA TGCGAGCGAG GTCTGGAAAT ACGGCGAGCG GGAGAGCACC
CGGGCGGCGA CGAACGAAAA AGGGGCGGTC CACCTCCTGA AGATGGCCTA CCTCATCGGG
TTTTTGAAGC AGCAACTCGT GGAGAACCGG TCGTCGACCC TGAGAGAGTT GTATTACATC
TCGGAAGGCT GGAAGAAGGC GAAGTTCGGT GCTCAGGACG AGAGCAACCA TCTCATCGAA
GACCTCGAGA TCATCACCGA GGTGCAGCGG GAGGCGTTTC ACCTCCGGCC GGAGGAGGAC
GGGGCCTCGG TCTTCGGGCC GCTGCGGATC CGGGAGACCA CCCGCCGGGG CGTCAAGGAG
ATGCACTGCC AGGAGGACGT CGGGGAGGCG GGCTACCCCA TCCCAAACAA CGTCGACAAC
CTCGAATTCG TCGACCACGA CGCGAAGTTC GTCATCGCCA TCGAGACCGG CGGTATGTAC
GCCCGTCTTA TGGAGAACGG GTTCGACGAG GAGTACGGGG CGGTTCTGGT CCACCTCAAG
GGGCAGCCGG CGCGCTCGAC GCGGAGAGTC CTGCGGAAAC TCAACGACTC GCTCGGTCTC
CCCGTCGTGG TCTTCACCGA CGGCGATCCC TGGTCCTACC GGATCTACGC GAGCGTCGCC
TACGGTTCGA TCAAGAGCGC GCATATGTCG GAACTTCTCG CGACCCCCCA GGCGCAGTTC
ATCGGCGTGC AGCCTTCCGA CATCTCCGAC TACAACCTCC CCGCCGACAA ACTCACCGAG
CAGGACGTCA GCGCCTTAAA AGCGGAACTG ACCGACCCGA GGTTCGCGAC CGACTACTGG
CGGAGCCAGA TCAACCTGCA GCTCGAGATG AAGCTGAAGT CGGAACAGCA GGCGTTCGCG
AGCAGGGGGC TCGACTTCGT GACGAAGGAG TACCTCCCGA CGCGGTTGTC GGAGATGGGG
ATCATTTGA
 
Protein sequence
MSREEMDALA KERLVGIART WYDQMRDGIV PFIRLPTRTK RNIEYDDASE VWKYGEREST 
RAATNEKGAV HLLKMAYLIG FLKQQLVENR SSTLRELYYI SEGWKKAKFG AQDESNHLIE
DLEIITEVQR EAFHLRPEED GASVFGPLRI RETTRRGVKE MHCQEDVGEA GYPIPNNVDN
LEFVDHDAKF VIAIETGGMY ARLMENGFDE EYGAVLVHLK GQPARSTRRV LRKLNDSLGL
PVVVFTDGDP WSYRIYASVA YGSIKSAHMS ELLATPQAQF IGVQPSDISD YNLPADKLTE
QDVSALKAEL TDPRFATDYW RSQINLQLEM KLKSEQQAFA SRGLDFVTKE YLPTRLSEMG
II