Gene Memar_1493 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_1493 
Symbol 
ID4846341 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp1492315 
End bp1492779 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content55% 
IMG OID640116185 
Productribonuclease III 
Protein accessionYP_001047404 
Protein GI126179439 
COG category[K] Transcription 
COG ID[COG0571] dsRNA-specific ribonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000322958 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACCCG ATCTCGAAGA GAGGATCAAT TACTCTTTCA AGCAAAAAGA TCTCCTCCAG 
CGTGCCCTGC TCCATCGGTC GCGTTCGAAT GAAGAGCGAC AGAAGCAGAA AATCTGCGAG
GACCAGGACG CCCTCCGGAC GCTGGGCGAC GCGGTCCTGA AAACAATATT GTGCGATCTC
CTCATGCGTT CGGGGTACGA GACGAAAGGC GAGATCACCA TAAAGAAAAG CACCATTGAA
CGCCGGCCGT TTCTTGCCGA ACTCGGGAGG CGGTTTGATC TGCAGGATAA AATCCTTGTC
GGAGAAGGCG CCAGAATGCA GAAGCATAAC GAAGAGCCCA ACGTCATTGC CGAGACGCTC
GAGGCGATCA TCGGGGCGAT GTACCTGGAC GGCGGATACG AGTCGGCAAA GAAGGCCGTC
TCCGGATGGT ACGAGCCCTA CCGGGAAGAG ATGCTGAAAG GGTAG
 
Protein sequence
MEPDLEERIN YSFKQKDLLQ RALLHRSRSN EERQKQKICE DQDALRTLGD AVLKTILCDL 
LMRSGYETKG EITIKKSTIE RRPFLAELGR RFDLQDKILV GEGARMQKHN EEPNVIAETL
EAIIGAMYLD GGYESAKKAV SGWYEPYREE MLKG